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D4G4W0 (D4G4W0_BACNB) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D4G4W0 [UniParc].

Last modified May 18, 2010. Version 1.
Checksum: 9F9F435223C73756

FASTA47752,757
        10         20         30         40         50         60 
MFAKRFKTSL LPLFAGFLLL FYLVLAGPAA ASAETANKSN ELTAPSIKSG TILHAWNWSF 

        70         80         90        100        110        120 
NTLKHNMKDI HDAGYTAIQT SPINQVKEGN QGDKSMSNWY WLYQPTSYQI GNRYLGTEQE 

       130        140        150        160        170        180 
FKEMCAAAEE YGIKVIVDAV INHTTSDYAA ISNEVKSIPN WTHGNTQIKN WSDRWDVTQN 

       190        200        210        220        230        240 
SLPGLYDWNT QNTQVQSYLK RFLERALNDG ADGFRFDAAK HIELPDDGSY GSQFWPNITN 

       250        260        270        280        290        300 
TSAEFQYGEI LQDSASRDAA YANYMDVTAS NYGHSIRSAL KNRNLGVSNI SHYASDVSAD 

       310        320        330        340        350        360 
KLVTWVESHD TYANDDEEST WMSDDDIRLG WAVIASRSGS TPLFFSRPEG GGNGVRFPGK 

       370        380        390        400        410        420 
SQIGDRGSAL FEDQAITAVN RFHNVMAGQH EELSNPNGNN QIFMNQRGSH GVVLANAGSS 

       430        440        450        460        470 
SVSINTATKL PDGRYDNKAG AGSFQVNDGK LTGTINARSV AVLYPDDIEI RCNTFFQ 

« Hide

References

[1]"Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data."
Nishito Y., Osana Y., Hachiya T., Popendorf K., Toyoda A., Fujiyama A., Itaya M., Sakakibara Y.
BMC Genomics 11:243-243(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BEST195 EMBL BAI83766.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP011541 Genomic DNA. Translation: BAI83766.1.
RefSeqYP_005559469.1. NC_017196.1.

3D structure databases

ProteinModelPortalD4G4W0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI83766; BAI83766; BSNT_00538.
GeneID14102048.
KEGGbso:BSNT_00538.
PATRIC42727943. VBIBacSub97792_1190.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD4G4W0_BACNB
AccessionPrimary (citable) accession number: D4G4W0
Entry history
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)