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Protein
Submitted name:

HTH-type transcriptional regulator ArcR

Gene

arcR

Organism
Staphylococcus epidermidis M23864:W2(grey)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HTH-type transcriptional regulator ArcRImported
Gene namesi
Name:arcRImported
ORF Names:HMPREF0794_1302Imported
OrganismiStaphylococcus epidermidis M23864:W2(grey)Imported
Taxonomic identifieri525375 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000004733 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD4FL64.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 127Cyclic nucleotide-bindingInterPro annotationAdd BLAST87
Domaini163 – 217HTH crp-typeInterPro annotationAdd BLAST55

Family and domain databases

CDDicd00038. CAP_ED. 1 hit.
Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.

Sequencei

Sequence statusi: Complete.

D4FL64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGNQMFCRE NELDESFKQL ASYINIPVGV LLPFKSQCFV RHYNKGQIVY
60 70 80 90 100
YSSDETTHIY LLLKGNIMRE NFNLNGDVYR YLNREKVLFP LNNLFQDKVP
110 120 130 140 150
NEMCTALTDC EMIGIPRDLI EYLCKNHEEI FVKLFSLLSE TQCQHIEYNM
160 170 180 190 200
ALTSKLAKER VTKILRYLCQ TVGYDHDEFY EIKHFMTIQL LSDMAGISRE
210 220
TTSHIINELR EEKILFKNSK NWLVSKDL
Length:228
Mass (Da):26,924
Last modified:May 18, 2010 - v1
Checksum:i07370DBD75C1D475
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADMU01000029 Genomic DNA. Translation: EFE58871.1.
RefSeqiWP_001831835.1. NZ_GG749255.1.

Genome annotation databases

EnsemblBacteriaiEFE58871; EFE58871; HMPREF0794_1302.

Similar proteinsi

Entry informationi

Entry nameiD4FL64_STAEP
AccessioniPrimary (citable) accession number: D4FL64
Entry historyiIntegrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: October 25, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported