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D4AJD4 (D4AJD4_ARTBC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1020 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
D4AJD4 [UniParc].

Last modified May 18, 2010. Version 1.
Checksum: E34AC539D072D3A8

FASTA1,020116,241
        10         20         30         40         50         60 
MEPNPGGAIR ETERELDEKP RNHGQTLPFH DLFISLFNPL NDLKKKPAGP PAARRKAGPT 

        70         80         90        100        110        120 
GRNNLSPHEL RRNVIERFIS RWRQQVGNDF FPAFRLIVPE KDRDRAMYGL KEKAIGKLLV 

       130        140        150        160        170        180 
KVMKIDKNSE DGYNLLNWKL PGQRAATAMT GDFAGRCFEV ISKRPLRTEV GDMSIADVNS 

       190        200        210        220        230        240 
RLDDLAVASK EDAQLPILAE FYRRMNPEEM MWLIRIILRQ MKVGATERTF FEIWHPDAES 

       250        260        270        280        290        300 
LFNISSSLRR VCWELYLPSI RLEADEARVT LMQCFQPQLA QFQMHSFQKI IERMRLAEDD 

       310        320        330        340        350        360 
PEFWIEEKLD GERMQLHMET NSSIPGGKRF EFWSRKAKEY TYLYGNGFYD DNGSLTRHLK 

       370        380        390        400        410        420 
NAFADGVESI ILDGEMITWD PEQDAPVPFG TLKTAALAEQ RNPFSASGHR PLFRIFDIVY 

       430        440        450        460        470        480 
LNGKPLTRYT LRDRRRALEA SVIPVHRRFE IHPYQVGKSA SDIEPLLRKV VAEASEGLVL 

       490        500        510        520        530        540 
KNPNSPYRLN ERNDDWMKVK PDYMTEFGES LDCIVVGGYY GSGKRGGNIS SYLCGLRVDD 

       550        560        570        580        590        600 
THAEDGTNPM KCYSFCKVGG GFTAADYANI RHHTDGKWHD WDPKKPPTEY IELAGGDAQH 

       610        620        630        640        650        660 
ERPDVWIKPD DSIVVCVKAA AVTPSDQFRL GLTVRFPRFK RLRMDKDWQS ALSVQEFMDL 

       670        680        690        700        710        720 
KAGAEQEKKE KDFQVDNSRR KKTKRSKKKE LTVAGSGEPN VAYVGSKTHI FDGLSFCGLK 

       730        740        750        760        770        780 
IQALEVNYAN IFIVVMTESV KPMKKSKADL EQLIKANGGK IYQTNNAAKD TYCIADRRTV 

       790        800        810        820        830        840 
KVASLQKSGL ENVIRPCWIS DCISQNEHDI GESSILLPLE PRHMFFTKED QKEEISNNVD 

       850        860        870        880        890        900 
KYDDSFARDT SIAELTEILH KMDAISDISG EERLDIMSDL TLDGDQGSVH SDVEGWLFKN 

       910        920        930        940        950        960 
LTIFFAPCSH LSSVPGEPYV DALSIRQQLA RNITIFTGAT VTDQQKNNRI THVIVDPSAD 

       970        980        990       1000       1010       1020 
RDPETGKAKN YTTLRSEFAT RRAIPHFVTV QWVEECWKEK TLVDEERMYS MPAIALPGLC 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ABSU01000001 Genomic DNA. Translation: EFE36857.1.
RefSeqXP_003017502.1. XM_003017456.1.

3D structure databases

ProteinModelPortalD4AJD4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9524612.
KEGGabe:ARB_04383.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD4AJD4_ARTBC
AccessionPrimary (citable) accession number: D4AJD4
Entry history
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: November 13, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)