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Protein
Submitted name:

Receptor (chemosensory) transporter protein 1

Gene

Rtp1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported

Enzyme and pathway databases

ReactomeiR-RNO-381753. Olfactory Signaling Pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
Receptor (chemosensory) transporter protein 1Imported
Submitted name:
Receptor transporter protein 1 (Predicted)Imported
Gene namesi
Name:Rtp1Imported
Synonyms:Rtp1_predictedImported
ORF Names:rCG_36707Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1560980. Rtp1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei238 – 257HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029915.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini87 – 197zf-3CxxCInterPro annotationAdd BLAST111

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IE69. Eukaryota.
ENOG41119VJ. LUCA.
GeneTreeiENSGT00530000063222.
OMAiTDETMCK.
OrthoDBiEOG091G0DS4.
TreeFamiTF333246.

Family and domain databases

InterProiView protein in InterPro
IPR026096. R-trans_p.
IPR026692. RTP1.
IPR027377. Znf-3CxxC.
PANTHERiPTHR14402. PTHR14402. 1 hit.
PTHR14402:SF25. PTHR14402:SF25. 1 hit.
PfamiView protein in Pfam
PF13695. zf-3CxxC. 1 hit.
SMARTiView protein in SMART
SM01328. zf-3CxxC. 1 hit.

Sequencei

Sequence statusi: Complete.

D4AEN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIFRPWRLR CPALHLPSFP TFSIKWSLPS LPTDEDMCKS VTTGEWKKVF
60 70 80 90 100
YEKMEEVKPA DSWDFIIDPN LKHNVLAPGW KQYLELHASG RFHCSWCWHT
110 120 130 140 150
WQSPHVVILF HMYLDKAQRA GSVRMRVFKQ LCYECGTARL DESSMLEENI
160 170 180 190 200
ESLVDNLITS LREQCYGERG GHYRIHVASR QDNRRHRGEF CEACQEGIVH
210 220 230 240 250
WKPSEKLLEE EATTYTFSRA PSPTKPQAET GSGCNFCSIP WCLFWATVLL
260
LIIYLQFSFR SSV
Length:263
Mass (Da):30,773
Last modified:April 20, 2010 - v1
Checksum:iAA1D7A0BEDD60710
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034599 Genomic DNA. No translation available.
CH473999 Genomic DNA. Translation: EDL78088.1.
RefSeqiNP_001099340.1. NM_001105870.1.
UniGeneiRn.218465.

Genome annotation databases

EnsembliENSRNOT00000032383; ENSRNOP00000029915; ENSRNOG00000021992.
GeneIDi288006.
KEGGirno:288006.
UCSCiRGD:1560980. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034599 Genomic DNA. No translation available.
CH473999 Genomic DNA. Translation: EDL78088.1.
RefSeqiNP_001099340.1. NM_001105870.1.
UniGeneiRn.218465.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000032383; ENSRNOP00000029915; ENSRNOG00000021992.
GeneIDi288006.
KEGGirno:288006.
UCSCiRGD:1560980. rat.

Organism-specific databases

CTDi132112.
RGDi1560980. Rtp1.

Phylogenomic databases

eggNOGiENOG410IE69. Eukaryota.
ENOG41119VJ. LUCA.
GeneTreeiENSGT00530000063222.
OMAiTDETMCK.
OrthoDBiEOG091G0DS4.
TreeFamiTF333246.

Enzyme and pathway databases

ReactomeiR-RNO-381753. Olfactory Signaling Pathway.

Family and domain databases

InterProiView protein in InterPro
IPR026096. R-trans_p.
IPR026692. RTP1.
IPR027377. Znf-3CxxC.
PANTHERiPTHR14402. PTHR14402. 1 hit.
PTHR14402:SF25. PTHR14402:SF25. 1 hit.
PfamiView protein in Pfam
PF13695. zf-3CxxC. 1 hit.
SMARTiView protein in SMART
SM01328. zf-3CxxC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD4AEN1_RAT
AccessioniPrimary (citable) accession number: D4AEN1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 7, 2017
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.