SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D4AE09

- D4AE09_RAT

UniProt

D4AE09 - D4AE09_RAT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Cytochrome P450, family 39, subfamily a, polypeptide 1 (Predicted), isoform CRA_a
Gene
Cyp39a1, Cyp39a1_predicted, rCG_43541
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. heme binding Source: InterPro
  2. iron ion binding Source: InterPro
  3. oxysterol 7-alpha-hydroxylase activity Source: Ensembl
  4. steroid 7-alpha-hydroxylase activity Source: Ensembl
Complete GO annotation...

GO - Biological processi

  1. bile acid biosynthetic process Source: Ensembl
  2. cholesterol catabolic process Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome P450, family 39, subfamily a, polypeptide 1 (Predicted), isoform CRA_aImported
Submitted name:
Protein Cyp39a1Imported
Gene namesi
Name:Cyp39a1Imported
Synonyms:Cyp39a1_predictedImported
ORF Names:rCG_43541Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 9

Organism-specific databases

RGDi1307471. Cyp39a1.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00550000074551.
KOiK07439.
OMAiDRWKEAN.
OrthoDBiEOG7W153H.
TreeFamiTF105090.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR002403. Cyt_P450_E_grp-IV.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00465. EP450IV.
SUPFAMiSSF48264. SSF48264. 1 hit.

Sequencei

Sequence statusi: Complete.

D4AE09-1 [UniParc]FASTAAdd to Basket

« Hide

MGIMELFSPI AIAVLGSCVL FLFSRWKNLR GPPCIQGWIP WIGAGFEFGK    50
APLEFIEKAR IKYGPVFTVF AVGKRMTFVT EEEGINVLLK SKHVDFELAV 100
QRPLYHTAWI PKNIFFALHE KLYVLMKGKM GTFNTHHFTG QLTEEFHDQL 150
EGLGTHGTMD LNDFVRYLLY PATLNTLFMK GLFLTDKRKI KEFYQHFKTY 200
DEGFEYGSQL PEWLLRNWSK SKRWLLALFE KNIGDIKTHG SAGHSETLLQ 250
AVLGMVETET RLHSPNYGLV MLWASLANAA PIAFWTLAYI LSHPDLHRTI 300
VESISSVFGT AGKDKIQVSE NDLKKLLLIK WCILESIRLR APGVITRKVV 350
KPVKILNHTV PSGDLLMLSP FWLHRNPKYF PEPESFKPER WKEANLDKYI 400
FLDYFMAFGG GKFQCPGRWF ALLEIQLCII LVLYKYECSL LDPLPKQAKF 450
SSFGGCPPAS REMPN 465
Length:465
Mass (Da):53,339
Last modified:April 20, 2010 - v1
Checksum:i09B7E3BA9FA8C41E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06058914 Genomic DNA. No translation available.
AABR06058915 Genomic DNA. No translation available.
AABR06058916 Genomic DNA. No translation available.
AABR06058917 Genomic DNA. No translation available.
AABR06058918 Genomic DNA. No translation available.
CH473987 Genomic DNA. Translation: EDM18705.1.
RefSeqiNP_001100363.1. NM_001106893.1.
UniGeneiRn.153360.

Genome annotation databases

EnsembliENSRNOT00000014051; ENSRNOP00000014051; ENSRNOG00000010519.
GeneIDi301264.
KEGGirno:301264.
UCSCiRGD:1307471. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06058914 Genomic DNA. No translation available.
AABR06058915 Genomic DNA. No translation available.
AABR06058916 Genomic DNA. No translation available.
AABR06058917 Genomic DNA. No translation available.
AABR06058918 Genomic DNA. No translation available.
CH473987 Genomic DNA. Translation: EDM18705.1 .
RefSeqi NP_001100363.1. NM_001106893.1.
UniGenei Rn.153360.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000014051 ; ENSRNOP00000014051 ; ENSRNOG00000010519 .
GeneIDi 301264.
KEGGi rno:301264.
UCSCi RGD:1307471. rat.

Organism-specific databases

CTDi 51302.
RGDi 1307471. Cyp39a1.

Phylogenomic databases

GeneTreei ENSGT00550000074551.
KOi K07439.
OMAi DRWKEAN.
OrthoDBi EOG7W153H.
TreeFami TF105090.

Miscellaneous databases

NextBioi 648423.

Family and domain databases

Gene3Di 1.10.630.10. 1 hit.
InterProi IPR001128. Cyt_P450.
IPR002403. Cyt_P450_E_grp-IV.
[Graphical view ]
Pfami PF00067. p450. 1 hit.
[Graphical view ]
PRINTSi PR00465. EP450IV.
SUPFAMi SSF48264. SSF48264. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4AE09_RAT
AccessioniPrimary (citable) accession number: D4AE09
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi