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D4ABF5

- D4ABF5_RAT

UniProt

D4ABF5 - D4ABF5_RAT

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Protein
Submitted name:

Protein Zfp703

Gene
Zfp703, rCG_43251
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. nucleic acid binding Source: InterPro

GO - Biological processi

  1. adherens junction assembly Source: Ensembl
  2. cellular response to estradiol stimulus Source: Ensembl
  3. mammary gland epithelial cell differentiation Source: Ensembl
  4. negative regulation of homotypic cell-cell adhesion Source: Ensembl
  5. negative regulation of transcription, DNA-templated Source: Ensembl
  6. positive regulation of cell migration Source: Ensembl
  7. positive regulation of epithelial to mesenchymal transition Source: Ensembl
  8. positive regulation of mammary gland epithelial cell proliferation Source: Ensembl
  9. regulation of canonical Wnt signaling pathway Source: Ensembl
  10. regulation of cell cycle Source: Ensembl
  11. regulation of transforming growth factor beta receptor signaling pathway Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Zfp703Imported
Submitted name:
RCG43251Imported
Gene namesi
Name:Zfp703Imported
ORF Names:rCG_43251Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 16

Organism-specific databases

RGDi1588249. Zfp703.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. nuclear matrix Source: Ensembl
  3. protein complex Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000014618.
OMAiCPPFPPH.
OrthoDBiEOG7WDN2N.
TreeFamiTF324968.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR022129. Tscrpt_rep_NocA-like.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF12402. nlz1. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 1 hit.
[Graphical view]
PROSITEiPS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4ABF5-1 [UniParc]FASTAAdd to Basket

« Hide

MSDSPAGSNP RTPESSGSGG SGGGGKRPAV PAVVSLLPPA DPLRQANRLP    50
IRVLKMLSAH TGHLLHPEYL QPLSSTPVSP IELDAKKSPL ALLAQTCSQI 100
GKPDPPPSSK LNSVAAAAAN GLGSEKDPSR SAPGAASAAA ALKQLGDSPA 150
EDKSSFKPYS KGSGGGDSRK DGGSSSVSST TSSSSSSPGD KAGFRVPSAA 200
CPPFPPHGAA VSTSSNSSSP GGSRGGSPHH SDCKSGSGGA GGGGELDKKD 250
QEAKPSPEPA AGSRGSSGDS AHGGPEATAS GRKSEPPSAL VGAGHVAPVS 300
PYKPGHSVFP LPPSSIGYHG SIVGAYAGYP SQFVPGLDPS KSGLVGGQLS 350
GGLGLPPGKP PSSSPLTGAS PPSFLQGLCR DPYCLGGYHS ASHLGGSSCS 400
TCSAHDPAGP SLKASGYPLV YPGHPLQPAA LSSSAAQAAL PGHPLYTYGF 450
MLQNEPLPHS CNWVAASGPC DKRFATSEEL LSHLRTHTAL PGAEKLLAAY 500
PGASSLGSAA AAAAAAASCH LHLPPPAAPG SPGSLSLRSP HTLGLSRYHP 550
YGKSHLSTAG GLAVPSLPTA GPYYSPYALY GQRLASASAL GYQ 593
Length:593
Mass (Da):58,556
Last modified:April 20, 2010 - v1
Checksum:i9A02BABFB9D6C228
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06088953 Genomic DNA. No translation available.
CH473970 Genomic DNA. Translation: EDM09087.1.
RefSeqiNP_001102895.1. NM_001109425.1.
UniGeneiRn.15384.

Genome annotation databases

EnsembliENSRNOT00000019002; ENSRNOP00000019001; ENSRNOG00000014199.
GeneIDi680717.
KEGGirno:680717.
UCSCiRGD:1588249. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06088953 Genomic DNA. No translation available.
CH473970 Genomic DNA. Translation: EDM09087.1 .
RefSeqi NP_001102895.1. NM_001109425.1.
UniGenei Rn.15384.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000019002 ; ENSRNOP00000019001 ; ENSRNOG00000014199 .
GeneIDi 680717.
KEGGi rno:680717.
UCSCi RGD:1588249. rat.

Organism-specific databases

CTDi 353310.
RGDi 1588249. Zfp703.

Phylogenomic databases

GeneTreei ENSGT00390000014618.
OMAi CPPFPPH.
OrthoDBi EOG7WDN2N.
TreeFami TF324968.

Miscellaneous databases

NextBioi 719347.

Family and domain databases

Gene3Di 3.30.160.60. 1 hit.
InterProi IPR022129. Tscrpt_rep_NocA-like.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF12402. nlz1. 1 hit.
[Graphical view ]
SMARTi SM00355. ZnF_C2H2. 1 hit.
[Graphical view ]
PROSITEi PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4ABF5_RAT
AccessioniPrimary (citable) accession number: D4ABF5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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