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D4ABF5

- D4ABF5_RAT

UniProt

D4ABF5 - D4ABF5_RAT

Protein
Submitted name:

Protein Zfp703

Gene

Zfp703

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. adherens junction assembly Source: Ensembl
    2. cellular response to estradiol stimulus Source: Ensembl
    3. mammary gland epithelial cell differentiation Source: Ensembl
    4. negative regulation of homotypic cell-cell adhesion Source: Ensembl
    5. negative regulation of transcription, DNA-templated Source: Ensembl
    6. positive regulation of cell migration Source: Ensembl
    7. positive regulation of epithelial to mesenchymal transition Source: Ensembl
    8. positive regulation of mammary gland epithelial cell proliferation Source: Ensembl
    9. regulation of canonical Wnt signaling pathway Source: Ensembl
    10. regulation of cell cycle Source: Ensembl
    11. regulation of transforming growth factor beta receptor signaling pathway Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Zfp703Imported
    Submitted name:
    RCG43251Imported
    Gene namesi
    Name:Zfp703Imported
    ORF Names:rCG_43251Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 16

    Organism-specific databases

    RGDi1588249. Zfp703.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. nuclear matrix Source: Ensembl
    3. protein complex Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000014618.
    OMAiCPPFPPH.
    OrthoDBiEOG7WDN2N.
    TreeFamiTF324968.

    Family and domain databases

    Gene3Di3.30.160.60. 1 hit.
    InterProiIPR022129. Tscrpt_rep_NocA-like.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF12402. nlz1. 1 hit.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 1 hit.
    [Graphical view]
    PROSITEiPS50157. ZINC_FINGER_C2H2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4ABF5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDSPAGSNP RTPESSGSGG SGGGGKRPAV PAVVSLLPPA DPLRQANRLP    50
    IRVLKMLSAH TGHLLHPEYL QPLSSTPVSP IELDAKKSPL ALLAQTCSQI 100
    GKPDPPPSSK LNSVAAAAAN GLGSEKDPSR SAPGAASAAA ALKQLGDSPA 150
    EDKSSFKPYS KGSGGGDSRK DGGSSSVSST TSSSSSSPGD KAGFRVPSAA 200
    CPPFPPHGAA VSTSSNSSSP GGSRGGSPHH SDCKSGSGGA GGGGELDKKD 250
    QEAKPSPEPA AGSRGSSGDS AHGGPEATAS GRKSEPPSAL VGAGHVAPVS 300
    PYKPGHSVFP LPPSSIGYHG SIVGAYAGYP SQFVPGLDPS KSGLVGGQLS 350
    GGLGLPPGKP PSSSPLTGAS PPSFLQGLCR DPYCLGGYHS ASHLGGSSCS 400
    TCSAHDPAGP SLKASGYPLV YPGHPLQPAA LSSSAAQAAL PGHPLYTYGF 450
    MLQNEPLPHS CNWVAASGPC DKRFATSEEL LSHLRTHTAL PGAEKLLAAY 500
    PGASSLGSAA AAAAAAASCH LHLPPPAAPG SPGSLSLRSP HTLGLSRYHP 550
    YGKSHLSTAG GLAVPSLPTA GPYYSPYALY GQRLASASAL GYQ 593
    Length:593
    Mass (Da):58,556
    Last modified:April 20, 2010 - v1
    Checksum:i9A02BABFB9D6C228
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06088953 Genomic DNA. No translation available.
    CH473970 Genomic DNA. Translation: EDM09087.1.
    RefSeqiNP_001102895.1. NM_001109425.1.
    UniGeneiRn.15384.

    Genome annotation databases

    EnsembliENSRNOT00000019002; ENSRNOP00000019001; ENSRNOG00000014199.
    GeneIDi680717.
    KEGGirno:680717.
    UCSCiRGD:1588249. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06088953 Genomic DNA. No translation available.
    CH473970 Genomic DNA. Translation: EDM09087.1 .
    RefSeqi NP_001102895.1. NM_001109425.1.
    UniGenei Rn.15384.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000019002 ; ENSRNOP00000019001 ; ENSRNOG00000014199 .
    GeneIDi 680717.
    KEGGi rno:680717.
    UCSCi RGD:1588249. rat.

    Organism-specific databases

    CTDi 353310.
    RGDi 1588249. Zfp703.

    Phylogenomic databases

    GeneTreei ENSGT00390000014618.
    OMAi CPPFPPH.
    OrthoDBi EOG7WDN2N.
    TreeFami TF324968.

    Miscellaneous databases

    NextBioi 719347.

    Family and domain databases

    Gene3Di 3.30.160.60. 1 hit.
    InterProi IPR022129. Tscrpt_rep_NocA-like.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF12402. nlz1. 1 hit.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 1 hit.
    [Graphical view ]
    PROSITEi PS50157. ZINC_FINGER_C2H2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD4ABF5_RAT
    AccessioniPrimary (citable) accession number: D4ABF5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3