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D4AB17

- D4AB17_RAT

UniProt

D4AB17 - D4AB17_RAT

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Protein
Submitted name: Protein LOC100912917
Gene
LOC100912917, Pfas
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphoribosylformylglycinamidine synthase activity Source: InterPro

GO - Biological processi

  1. 'de novo' IMP biosynthetic process Source: InterPro
  2. glutamine metabolic process Source: RGD
  3. response to drug Source: RGD
  4. ribonucleoside monophosphate biosynthetic process Source: RGD
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_217264. Purine ribonucleoside monophosphate biosynthesis.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein LOC100912917Imported
Gene namesi
Name:LOC100912917Imported
Synonyms:PfasImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 10

Organism-specific databases

RGDi6485156. LOC100912917.
1304926. Pfas.

PTM / Processingi

Proteomic databases

PRIDEiD4AB17.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000007600.
OMAiPPKMSRI.
OrthoDBiEOG7353X4.
TreeFamiTF106371.

Family and domain databases

Gene3Di3.30.1330.10. 2 hits.
3.40.50.880. 1 hit.
InterProiIPR010918. AIR_synth_C_dom.
IPR000728. AIR_synth_N_dom.
IPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR010073. PRibForGlyAmidine_synth.
IPR016188. PurM_N-like.
[Graphical view]
PfamiPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 2 hits.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
SSF55326. SSF55326. 2 hits.
SSF56042. SSF56042. 2 hits.
TIGRFAMsiTIGR01735. FGAM_synt. 1 hit.
PROSITEiPS51273. GATASE_TYPE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4AB17-1 [UniParc]FASTAAdd to Basket

« Hide

MMLLGSPGWS LAPMICCWRW DPGTLNFSTP ASTNIVSVCQ AAGLRAVDRV     50
ETTRRYRLSF AKQPTAEMEA ISLAALHDRM TEQHYPDPIQ SFSPQSIPAP 100
LKDSINILAE GRPALEKANQ ELGLALDSWD LDFYTKRFQE LQRNPSTVEV 150
FDLAQSNSEH SRHWFFKGQL HVDGKKLARS LFESIMSTQS SSNPNNVLKF 200
CDNSSAIQGK EVRFLRPEDS TRPSCFRQQR GLRHVVFTAE THNFPTGVAP 250
FSGATTGTGG RIRDVQCTGR GAHVVAGTAG YCFGNLHIPG YNLPWEDPSF 300
QYPGNFARPL EVAIEASNGA SDYGNKFGEP VLAGFARSLG LQLPDGQRRE 350
WIKPIMFSGG IGSMEAKHVG KEPPEPGMEV VKVGGPVYRI GVGGGAASSV 400
QVQGDNTSDL DFGAVQRGDP EMEQKMNRVI RACVEAPGGN PICSLHDQGA 450
GGNGNVLKEL SEPAGAVIYT SRFQLGDPTL NALEIWGAEY QESNALLLRP 500
SDRDFLSRAS ARERCPACFV GTITGDKRIV LVDDRECLMG KSGQGDAPPT 550
PPTPVDLDLD WVLGKMPQKE FFLQRKPPVL QPLALPPDLS VGQALERVLR 600
LPAVASKRYL TNKVDRSVGG LVAQQQCVGP LQTPLADVAV VALSHQELVG 650
AATALGEQPV KSLLDPKAAA RLAVSEALTN LVFALVTDLR DVKCSGNWMW 700
AAKLPGEGAG LADACEAMVT VMAALGVAVD GGKDSLSMAA RVGTETVPAP 750
GSLVISAYAV CPDITATVTP DLKHPGGKGH LLYVPLSPGQ HRLGGTALAQ 800
CFSQLGEHPP DLDLPENLVR AFHITQGLLK GEWGPDRRLC SGHDVSDGGL 850
VTCLLEMAFA GNCGIEVDVP APGIHALPVL FAEEPGLVLE VQEADVAGVL 900
QRYQSAGLHC LELGHTGEAG PQAMVRVSVN GTVVVEEPVG QLRALWEETS 950
FQLDLLQAEP RCVTEEKQGL KERIGPSYCL PPTFPVASVP CKPGGPIPRV 1000
AILREEGSNG DREMADAFHL AGFEVWDVTM QDLCSGAVRL DTFRGVAFVG 1050
GFSYADVLGS AKGWAAAVTF NPQAREELGR FRRRPDTFSL GVCNGCQLLA 1100
LLGWVGSDPN EDQVEPDHDS QPAQPGLLLR HNLSGRFESR WATVRVEPGP 1150
ALMLRGMEGS VLPVWSAHGE GYMAFSSPEL QAKIKAKGLV PLHWADDDGN 1200
PTEQYPLNPN GSPGGIAGIC SPDGRHLALM PHPERAVRLW QWAWRPSPFD 1250
GLSTSPWLQL FINARNWTQE DSC 1273
Length:1,273
Mass (Da):137,053
Last modified:April 3, 2013 - v2
Checksum:i74FA1E59482C1D6F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06064370 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000007087; ENSRNOP00000007087; ENSRNOG00000005193.
UCSCiRGD:1304926. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06064370 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D4AB17.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000007087 ; ENSRNOP00000007087 ; ENSRNOG00000005193 .
UCSCi RGD:1304926. rat.

Organism-specific databases

RGDi 6485156. LOC100912917.
1304926. Pfas.

Phylogenomic databases

GeneTreei ENSGT00390000007600.
OMAi PPKMSRI.
OrthoDBi EOG7353X4.
TreeFami TF106371.

Enzyme and pathway databases

Reactomei REACT_217264. Purine ribonucleoside monophosphate biosynthesis.

Miscellaneous databases

NextBioi 35573916.

Family and domain databases

Gene3Di 3.30.1330.10. 2 hits.
3.40.50.880. 1 hit.
InterProi IPR010918. AIR_synth_C_dom.
IPR000728. AIR_synth_N_dom.
IPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR010073. PRibForGlyAmidine_synth.
IPR016188. PurM_N-like.
[Graphical view ]
Pfami PF00586. AIRS. 1 hit.
PF02769. AIRS_C. 2 hits.
[Graphical view ]
SUPFAMi SSF52317. SSF52317. 1 hit.
SSF55326. SSF55326. 2 hits.
SSF56042. SSF56042. 2 hits.
TIGRFAMsi TIGR01735. FGAM_synt. 1 hit.
PROSITEi PS51273. GATASE_TYPE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4AB17_RAT
AccessioniPrimary (citable) accession number: D4AB17
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: September 3, 2014
This is version 37 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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