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Protein
Submitted name:

CDGSH iron sulfur domain 2

Gene

Cisd2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
CDGSH iron sulfur domain 2Imported
Submitted name:
Similar to RIKEN cDNA 1500009M05 (Predicted)Imported
Gene namesi
Name:Cisd2Imported
Synonyms:RGD1566242_predictedImported
ORF Names:rCG_28708Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1566242. Cisd2.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei38 – 56HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSRNOG00000048258.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000066613.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini81 – 120ZnF_CDGSHInterPro annotationAdd BLAST40

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3461. Eukaryota.
ENOG41122II. LUCA.
GeneTreeiENSGT00390000001233.
OMAiTGYLAFC.
OrthoDBiEOG091G0XB4.
TreeFamiTF324661.

Family and domain databases

InterProiView protein in InterPro
IPR018967. FeS-contain_CDGSH-typ.
IPR019610. FeS-contain_mitoNEET_N.
PfamiView protein in Pfam
PF10660. MitoNEET_N. 1 hit.
PF09360. zf-CDGSH. 1 hit.
SMARTiView protein in SMART
SM00704. ZnF_CDGSH. 1 hit.

Sequencei

Sequence statusi: Complete.

D4AAE9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLDSVARIV KVQLPAYLKQ LPLPDSITGF ARLTVAEWLR LLPFLGVLAL
60 70 80 90 100
LGYLAVRPFF PKKKQQKDSL INLKIQKENP KVVNEINIED LNLTKAAYCR
110 120 130
CWRSKTFPAC DGSHNKHNEL TGDNVGPLIL RKKEV
Length:135
Mass (Da):15,293
Last modified:April 20, 2010 - v1
Checksum:i421FF1D2DB018DC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120718 Genomic DNA. No translation available.
CH473952 Genomic DNA. Translation: EDL82257.1.
RefSeqiNP_001178537.1. NM_001191608.1.
UniGeneiRn.24858.

Genome annotation databases

EnsembliENSRNOT00000074632; ENSRNOP00000066613; ENSRNOG00000048258.
GeneIDi295457.
KEGGirno:295457.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiD4AAE9_RAT
AccessioniPrimary (citable) accession number: D4AAE9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 7, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported