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D4A871

- D4A871_RAT

UniProt

D4A871 - D4A871_RAT

Protein
Submitted name:

Protein Lmod3

Gene

Lmod3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Lmod3Imported
    Gene namesi
    Name:Lmod3Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 4

    Organism-specific databases

    RGDi1564924. Lmod3.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoskeleton Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00740000115417.
    OMAiYMYWQKA.
    OrthoDBiEOG725DHJ.
    TreeFamiTF315841.

    Family and domain databases

    InterProiIPR004934. Tropomodulin.
    [Graphical view]
    PANTHERiPTHR10901. PTHR10901. 1 hit.
    PfamiPF03250. Tropomodulin. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4A871-1 [UniParc]FASTAAdd to Basket

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    MSEHSGNSDQ EDTLSEELDE DEILANLSPE ELKELQSEME VMAPDPHLPV    50
    GMIQKDQTDK APTGNFDHKS LVDYMYLQKA SRRMLEDERV PVSFVQSEEN 100
    TQKQHEVREK GIASMPQFLK EKLNSEILAK KRQSNGSNNV QETEDDEDEE 150
    DEEDEEDDED EDEGEEGDED EEDGDGEQAN RGKNEAKEQV HNNASICQQP 200
    ATRAMEEQKD TAETKGKGAK KIAKLDPKKL ALDTSFLKVS ARPSGNQTDL 250
    DGSLRRVRQN DPDMKELNLN NIENIPKEML LDFVNAMKKN KHIKSFSLAN 300
    VGADESVAFA LANMLRENRS ITTLNIESNF ITGKGIVAIM RCLQFNETLT 350
    ELRFHNQRHM LGHHAEMEIS RLLKANNTLL KMGYHFELPG PRMVVTNLLT 400
    RNQDKRRQKR QEEQQQQQLK EQRKLIAMLE NGLGLPPGMW ERLGGPMPDP 450
    RMQEFFQPSP GRSLAAQEVP FGARKEMIKN PPQPPQYKTD PDSFRVVKLK 500
    RIQRKSRMPE ARESQEKTNL KDVIKTLKPV PRNRPPPLVE ITPRDQLLND 550
    IRHSNVAYLK PVTLPNELF 569
    Length:569
    Mass (Da):65,080
    Last modified:April 3, 2013 - v2
    Checksum:i174BE5F41F652CE9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06032479 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000047453; ENSRNOP00000042274; ENSRNOG00000032443.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06032479 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000047453 ; ENSRNOP00000042274 ; ENSRNOG00000032443 .

    Organism-specific databases

    RGDi 1564924. Lmod3.

    Phylogenomic databases

    GeneTreei ENSGT00740000115417.
    OMAi YMYWQKA.
    OrthoDBi EOG725DHJ.
    TreeFami TF315841.

    Miscellaneous databases

    NextBioi 35573299.

    Family and domain databases

    InterProi IPR004934. Tropomodulin.
    [Graphical view ]
    PANTHERi PTHR10901. PTHR10901. 1 hit.
    Pfami PF03250. Tropomodulin. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD4A871_RAT
    AccessioniPrimary (citable) accession number: D4A871
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 25 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3