D4A871 (D4A871_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Lmod3 Ensembl ENSRNOP00000042274

Gene names

Name:

Lmod3 Ensembl ENSRNOP00000042274 RGD 1564924

Organism

Rattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000042274

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	569 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSRNOP00000042274

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoskeleton Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D4A871 [UniParc]. Last modified April 3, 2013. Version 2. Checksum: 174BE5F41F652CE9	FASTA	569	65,080
	10 20 30 40 50 60 MSEHSGNSDQ EDTLSEELDE DEILANLSPE ELKELQSEME VMAPDPHLPV GMIQKDQTDK 70 80 90 100 110 120 APTGNFDHKS LVDYMYLQKA SRRMLEDERV PVSFVQSEEN TQKQHEVREK GIASMPQFLK 130 140 150 160 170 180 EKLNSEILAK KRQSNGSNNV QETEDDEDEE DEEDEEDDED EDEGEEGDED EEDGDGEQAN 190 200 210 220 230 240 RGKNEAKEQV HNNASICQQP ATRAMEEQKD TAETKGKGAK KIAKLDPKKL ALDTSFLKVS 250 260 270 280 290 300 ARPSGNQTDL DGSLRRVRQN DPDMKELNLN NIENIPKEML LDFVNAMKKN KHIKSFSLAN 310 320 330 340 350 360 VGADESVAFA LANMLRENRS ITTLNIESNF ITGKGIVAIM RCLQFNETLT ELRFHNQRHM 370 380 390 400 410 420 LGHHAEMEIS RLLKANNTLL KMGYHFELPG PRMVVTNLLT RNQDKRRQKR QEEQQQQQLK 430 440 450 460 470 480 EQRKLIAMLE NGLGLPPGMW ERLGGPMPDP RMQEFFQPSP GRSLAAQEVP FGARKEMIKN 490 500 510 520 530 540 PPQPPQYKTD PDSFRVVKLK RIQRKSRMPE ARESQEKTNL KDVIKTLKPV PRNRPPPLVE 550 560 ITPRDQLLND IRHSNVAYLK PVTLPNELF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000042274.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000042274.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR06032479 Genomic DNA. No translation available.
IPI	IPI00568699.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000047453; ENSRNOP00000042274; ENSRNOG00000032443.
Organism-specific databases
RGD	1564924. Lmod3.
Phylogenomic databases
GeneTree	ENSGT00550000074341.
OrthoDB	EOG4J9MZT.
Family and domain databases
InterPro	IPR004934. Tropomodulin. [Graphical view]
PANTHER	PTHR10901. PTHR10901. 1 hit.
Pfam	PF03250. Tropomodulin. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35573299.

Entry information

Entry name

D4A871_RAT

Accession

Primary (citable) accession number: D4A871

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 3, 2013
Last modified:	May 1, 2013
This is version 19 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)