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Protein
Submitted name:

Protein Tacc2

Gene

Tacc2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. cell proliferation Source: GO_Central
  2. cerebral cortex development Source: GO_Central
  3. microtubule cytoskeleton organization Source: GO_Central
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Tacc2Imported
Gene namesi
Name:Tacc2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 1

Organism-specific databases

RGDi1303004. Tacc2.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: GO_Central
  2. microtubule cytoskeleton Source: GO_Central
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiD4A858.

Expressioni

Gene expression databases

ExpressionAtlasiD4A858. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliD4A858.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063855.
KOiK14282.
PhylomeDBiD4A858.

Family and domain databases

InterProiIPR007707. TACC.
[Graphical view]
PANTHERiPTHR13924. PTHR13924. 1 hit.
PfamiPF05010. TACC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4A858-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGNENSTSDH QRTSSVQSLR SLQPPGNSQT PQKQGDSPGS GAASIPGTND
60 70 80 90 100
VIQSAAPEDL GHPPLADSSR YGVTVSSVST HLTVQSTSPS AAHASLAPVA
110 120 130 140 150
SEHAALASAA AGPGVETPTA SCQHLAKNIN RSSDSEEAFE TPESTTPVKA
160 170 180 190 200
PPAPPPPPPE VTPEPEVIEP PAPEEPGCIS EPVVVPDGPR SESVEGSPFR
210 220 230 240 250
PSHSSSAVFD EDKPIASSGT YNLDFDSIEL VDNFQSLEPC SADYKGQECK
260 270 280 290 300
VSTRRKSTES VPPSKTTLSR SLSLQASDFD GASCPGSPEA GTLATDACGT
310 320 330 340 350
GSNSASSTLK RTKKTRPPSL KKKQATKKPT ETPPVKETQQ EPGEESPVPS
360 370 380 390 400
EEHLAPETKT ESATPEGTGC TLSEETSLES AAVPTATCPL TLESVEDVSP
410 420 430 440 450
LVSGGGRVQN SPPVGRKSVP LTTASEAVEV TLPDGGGQED LPAKGLSVRL
460 470 480 490 500
EFDYSEDKGS WESQQENAPP TKKIGKKPVA KMPLRRPKLK KTPEKLDNTP
510 520 530 540 550
ASPPRSPAEP SDIPIAKGTY TFDIDKWDDP NFNPFSSTSK MQESPTLSQQ
560 570 580 590 600
SYNFDPDACE ESLDPFKASS KTPSSPSKSP ASFEIPASTI EADGDGLNKP
610 620 630 640 650
AKKKKTPLKT DTFRVKKSPK RSPLSDPPSQ DPTPAATPEA PPVSTVVHAT
660 670 680 690 700
DEEKLAVTSQ KWTCMTVDLD ADKQDFPQPS DLSNFVNETK FNSPSEELDY
710 720 730 740 750
RNSYEIEYME KLGSSLPQDD DTPKKQALYL MFDTPQESPV KSPPVRMSDS
760 770 780 790 800
PTPCSGSSFE DTEALVNATA KLQHPVPRGL ASNQEPLLQL PEKSSQKELE
810 820 830 840 850
AMALGTPAEA IEITAPEGAF ASADALLSRL AHPASLCGAL GYLEPDLAEK
860 870 880 890 900
NPPVFAQKLQ EELEFAVMRI EALKLARQIA LASRSRQDTK REATHPPDVS
910 920 930 940 950
ISKTTLYSRI GPTEVEKPPG LLFQQPDLDS ALQVARAEVI AKEREVSEWR
960 970 980 990 1000
DKYEESRREV VEMRKIVAEY EKTIAQMIED EQREKSISHQ TVQQLVLEKE
1010 1020 1030 1040 1050
QALADLNSVE KSLADLFRRY EKMKEVLEGF RKNEEVLKKC AQEYLSRVKK
1060 1070 1080 1090 1100
EEQRYQALKV HAEEKLDRAN AEIAQVRGKA QQEQAAYQAS LRKEQLRVDA
1110 1120
LERTLEQKNK EIEELTKICD ELIAKMGKS
Length:1,129
Mass (Da):122,243
Last modified:April 20, 2010 - v1
Checksum:i2046823CEA24DCA4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06008948 Genomic DNA. No translation available.
AABR06008949 Genomic DNA. No translation available.
AABR06008950 Genomic DNA. No translation available.
AABR06008951 Genomic DNA. No translation available.
AABR06008952 Genomic DNA. No translation available.
AABR06008953 Genomic DNA. No translation available.
RefSeqiNP_001004418.1. NM_001004418.2.
UniGeneiRn.13989.

Genome annotation databases

EnsembliENSRNOT00000047161; ENSRNOP00000042296; ENSRNOG00000020457.
GeneIDi309025.
KEGGirno:309025.
UCSCiRGD:1303004. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06008948 Genomic DNA. No translation available.
AABR06008949 Genomic DNA. No translation available.
AABR06008950 Genomic DNA. No translation available.
AABR06008951 Genomic DNA. No translation available.
AABR06008952 Genomic DNA. No translation available.
AABR06008953 Genomic DNA. No translation available.
RefSeqiNP_001004418.1. NM_001004418.2.
UniGeneiRn.13989.

3D structure databases

ProteinModelPortaliD4A858.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiD4A858.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000047161; ENSRNOP00000042296; ENSRNOG00000020457.
GeneIDi309025.
KEGGirno:309025.
UCSCiRGD:1303004. rat.

Organism-specific databases

CTDi10579.
RGDi1303004. Tacc2.

Phylogenomic databases

GeneTreeiENSGT00530000063855.
KOiK14282.
PhylomeDBiD4A858.

Miscellaneous databases

NextBioi660012.

Gene expression databases

ExpressionAtlasiD4A858. baseline and differential.

Family and domain databases

InterProiIPR007707. TACC.
[Graphical view]
PANTHERiPTHR13924. PTHR13924. 1 hit.
PfamiPF05010. TACC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4A858_RAT
AccessioniPrimary (citable) accession number: D4A858
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 4, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.