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D4A770

- D4A770_RAT

UniProt

D4A770 - D4A770_RAT

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Protein
Submitted name:

Protein RGD1311164

Gene

RGD1311164

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein RGD1311164Imported
Submitted name:
Similar to DNA segment, Chr 6, Wayne State University 163, expressed (Predicted)Imported
Gene namesi
Name:RGD1311164Imported
Synonyms:RGD1311164_predictedImported
ORF Names:rCG_29582Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 4

Organism-specific databases

RGDi1311164. RGD1311164.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000010229.
OMAiEMEKVMQ.
OrthoDBiEOG741Z1Z.
TreeFamiTF314243.

Family and domain databases

InterProiIPR019311. DUF2362.
[Graphical view]
PANTHERiPTHR16525. PTHR16525. 1 hit.
PfamiPF10154. DUF2362. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4A770-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKNRERFSS KEREFVYKFQ IGSERLELRV PLRFPVDENA SHLHGRLMLL
60 70 80 90 100
HSLPCFIEND LKEALARFIE EESLRDHDSD AEACLEAVKS GEVDLHQLAS
110 120 130 140 150
TWAKAYAETT LEHARPEEPN WDEDFADVYH DLIHSPASET LLNLEHNYFV
160 170 180 190 200
SISELIGERD VELKKLRERQ GIEMEKVMQE LGKSLTDQDV NSLAAQHFES
210 220 230 240 250
QQDLENKWSN ELKQSTAIQK QEYQEWVIKL HQDLKNPNNS SLSEEIKVQP
260 270 280 290 300
SQFRESADAA GRIYEEQRKL EESFTIHLGA QLKTMHNLRL LRADMLDFCK
310 320 330 340 350
HKRTQGSGVK LHRLQTALSL YSTSLCGLVL LVDNRINSYS GIKRDFATVC
360 370 380 390 400
QECTDFHFPR IEEQLEVVQQ VALYARTQRR SKCKEARDSG NQNGGSDEKS
410 420 430 440 450
KNAERNYLNI LPGEFYITRH SNLSEIHVAF HLCVDDNVKS GNITARDPAI
460 470 480 490 500
MGLRNILKVC CTHDITTISI PLLLVHDMSE EMTIPWCLRR AELVFKCVKG
510 520 530 540 550
FMMEMASWDG GISRTVQFLV PQSISEEMFY QLSNMLPQIF RVSSTLTLTS

KH
Length:552
Mass (Da):63,619
Last modified:April 20, 2010 - v1
Checksum:i1E928892A77E3A85
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06033849 Genomic DNA. No translation available.
AABR06033850 Genomic DNA. No translation available.
AABR06033851 Genomic DNA. No translation available.
CH473964 Genomic DNA. Translation: EDM01821.1.
RefSeqiNP_001100093.1. NM_001106623.1.
UniGeneiRn.225116.

Genome annotation databases

EnsembliENSRNOT00000026838; ENSRNOP00000026838; ENSRNOG00000019808.
GeneIDi297607.
KEGGirno:297607.
UCSCiRGD:1311164. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06033849 Genomic DNA. No translation available.
AABR06033850 Genomic DNA. No translation available.
AABR06033851 Genomic DNA. No translation available.
CH473964 Genomic DNA. Translation: EDM01821.1 .
RefSeqi NP_001100093.1. NM_001106623.1.
UniGenei Rn.225116.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000026838 ; ENSRNOP00000026838 ; ENSRNOG00000019808 .
GeneIDi 297607.
KEGGi rno:297607.
UCSCi RGD:1311164. rat.

Organism-specific databases

CTDi 297607.
RGDi 1311164. RGD1311164.

Phylogenomic databases

GeneTreei ENSGT00390000010229.
OMAi EMEKVMQ.
OrthoDBi EOG741Z1Z.
TreeFami TF314243.

Miscellaneous databases

NextBioi 642503.

Family and domain databases

InterProi IPR019311. DUF2362.
[Graphical view ]
PANTHERi PTHR16525. PTHR16525. 1 hit.
Pfami PF10154. DUF2362. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4A770_RAT
AccessioniPrimary (citable) accession number: D4A770
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 1, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3