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D4A770

- D4A770_RAT

UniProt

D4A770 - D4A770_RAT

Protein
Submitted name:

Protein RGD1311164

Gene

RGD1311164

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein RGD1311164Imported
    Submitted name:
    Similar to DNA segment, Chr 6, Wayne State University 163, expressed (Predicted)Imported
    Gene namesi
    Name:RGD1311164Imported
    Synonyms:RGD1311164_predictedImported
    ORF Names:rCG_29582Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 4

    Organism-specific databases

    RGDi1311164. RGD1311164.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000010229.
    OMAiEMEKVMQ.
    OrthoDBiEOG741Z1Z.
    TreeFamiTF314243.

    Family and domain databases

    InterProiIPR019311. DUF2362.
    [Graphical view]
    PANTHERiPTHR16525. PTHR16525. 1 hit.
    PfamiPF10154. DUF2362. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4A770-1 [UniParc]FASTAAdd to Basket

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    MKKNRERFSS KEREFVYKFQ IGSERLELRV PLRFPVDENA SHLHGRLMLL    50
    HSLPCFIEND LKEALARFIE EESLRDHDSD AEACLEAVKS GEVDLHQLAS 100
    TWAKAYAETT LEHARPEEPN WDEDFADVYH DLIHSPASET LLNLEHNYFV 150
    SISELIGERD VELKKLRERQ GIEMEKVMQE LGKSLTDQDV NSLAAQHFES 200
    QQDLENKWSN ELKQSTAIQK QEYQEWVIKL HQDLKNPNNS SLSEEIKVQP 250
    SQFRESADAA GRIYEEQRKL EESFTIHLGA QLKTMHNLRL LRADMLDFCK 300
    HKRTQGSGVK LHRLQTALSL YSTSLCGLVL LVDNRINSYS GIKRDFATVC 350
    QECTDFHFPR IEEQLEVVQQ VALYARTQRR SKCKEARDSG NQNGGSDEKS 400
    KNAERNYLNI LPGEFYITRH SNLSEIHVAF HLCVDDNVKS GNITARDPAI 450
    MGLRNILKVC CTHDITTISI PLLLVHDMSE EMTIPWCLRR AELVFKCVKG 500
    FMMEMASWDG GISRTVQFLV PQSISEEMFY QLSNMLPQIF RVSSTLTLTS 550
    KH 552
    Length:552
    Mass (Da):63,619
    Last modified:April 20, 2010 - v1
    Checksum:i1E928892A77E3A85
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06033849 Genomic DNA. No translation available.
    AABR06033850 Genomic DNA. No translation available.
    AABR06033851 Genomic DNA. No translation available.
    CH473964 Genomic DNA. Translation: EDM01821.1.
    RefSeqiNP_001100093.1. NM_001106623.1.
    UniGeneiRn.225116.

    Genome annotation databases

    EnsembliENSRNOT00000026838; ENSRNOP00000026838; ENSRNOG00000019808.
    GeneIDi297607.
    KEGGirno:297607.
    UCSCiRGD:1311164. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06033849 Genomic DNA. No translation available.
    AABR06033850 Genomic DNA. No translation available.
    AABR06033851 Genomic DNA. No translation available.
    CH473964 Genomic DNA. Translation: EDM01821.1 .
    RefSeqi NP_001100093.1. NM_001106623.1.
    UniGenei Rn.225116.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000026838 ; ENSRNOP00000026838 ; ENSRNOG00000019808 .
    GeneIDi 297607.
    KEGGi rno:297607.
    UCSCi RGD:1311164. rat.

    Organism-specific databases

    CTDi 297607.
    RGDi 1311164. RGD1311164.

    Phylogenomic databases

    GeneTreei ENSGT00390000010229.
    OMAi EMEKVMQ.
    OrthoDBi EOG741Z1Z.
    TreeFami TF314243.

    Miscellaneous databases

    NextBioi 642503.

    Family and domain databases

    InterProi IPR019311. DUF2362.
    [Graphical view ]
    PANTHERi PTHR16525. PTHR16525. 1 hit.
    Pfami PF10154. DUF2362. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD4A770_RAT
    AccessioniPrimary (citable) accession number: D4A770
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3