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Protein
Submitted name:

Phosphatidylinositol glycan anchor biosynthesis, class T

Gene

Pigt

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-162791 Attachment of GPI anchor to uPAR

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphatidylinositol glycan anchor biosynthesis, class TImported
Gene namesi
Name:PigtImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1307156 Pigt

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei546 – 567HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiD4A604
PeptideAtlasiD4A604
PRIDEiD4A604

Expressioni

Gene expression databases

BgeeiENSRNOG00000014690

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019761

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2407 Eukaryota
ENOG410XRR0 LUCA
GeneTreeiENSGT00390000018558
OMAiDANHGHY
OrthoDBiEOG091G06DH
TreeFamiTF105921

Family and domain databases

InterProiView protein in InterPro
IPR007245 PIG-T
PANTHERiPTHR12959 PTHR12959, 1 hit
PfamiView protein in Pfam
PF04113 Gpi16, 1 hit

Sequencei

Sequence statusi: Complete.

D4A604-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATFSGRRRC WEAEAAAGMA AAMPLGLSLL LLVLVGQGCC GRVEGPRDSL
60 70 80 90 100
REELVITPLP SGDVAATFQF RTRWDSDLQR EGVSHYRLFP KALGQLISKY
110 120 130 140 150
SLRELHLSFT QGFWRTRYWG PPFLQAPSGA ELWVWFQDTV TDVDKSWKEL
160 170 180 190 200
SNVLSGIFCA SLNFIDSTNT VTPTASFKPL GLANDTDHYF LRYAVLPREV
210 220 230 240 250
VCTENLTPWK KLLPCSSKAG LSVLLKADRL FHTSYHSQAV HIRPICRNAH
260 270 280 290 300
CTSISWELRQ TLSVVFDAFI TGQGKKDWSL FRMFSRTLTE ACPLASQSLV
310 320 330 340 350
YVDITGYSQD NETLEVSPPP TSTYQDVILG TRKTYAVYDL FDTAMINNSR
360 370 380 390 400
NLNIQLKWKR PPDNEALPVP FLHAQRYVSG YGLQKGELST LLYNSHPYRA
410 420 430 440 450
FPVLLLDAVP WYLRLYVHTL TITSKGKDNK PSYIHYQPAQ DRQQPHLLEM
460 470 480 490 500
LIQLPANSVT KVSIQFERAL LKWTEYTPDP NHGFYVSPSV LSALVPSMVA
510 520 530 540 550
AKPVDWEESP LFNTLFPVSD GSSYFVRLYT EPLLVNLPTP DFSMPYNVIC
560 570 580 590
LTCTVVAVCY GSFYNLLTRT FHIEEPKSGG LAKRLANLIR RARGVPPL
Length:598
Mass (Da):67,503
Last modified:July 22, 2015 - v2
Checksum:i7D55F69F2E8D4C9D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07054564 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000019761; ENSRNOP00000019761; ENSRNOG00000014690
UCSCiRGD:1307156 rat

Similar proteinsi

Entry informationi

Entry nameiD4A604_RAT
AccessioniPrimary (citable) accession number: D4A604
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: March 28, 2018
This is version 60 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health