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Protein
Submitted name:

Phosphoinositide-interacting regulator of transient receptor potential channels

Gene

Pirt

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphoinositide-interacting regulator of transient receptor potential channelsImported
Submitted name:
Similar to RIKEN cDNA A530088H08 gene (Predicted)Imported
Gene namesi
Name:PirtImported
Synonyms:RGD1565284_predictedImported
ORF Names:rCG_33146Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi1565284. Pirt.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei54 – 77HelicalSequence analysisAdd BLAST24
Transmembranei89 – 113HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSRNOG00000037852.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000054311.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IWQ6. Eukaryota.
ENOG410YYIW. LUCA.
GeneTreeiENSGT00390000016891.
OMAiVWIPIIR.
OrthoDBiEOG091G0ZPU.
TreeFamiTF328608.

Family and domain databases

InterProiView protein in InterPro
IPR028068. PIRT.
PfamiView protein in Pfam
PF15099. PIRT. 1 hit.

Sequencei

Sequence statusi: Complete.

D4A4M4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVLPKALEV DERSPESKDL LPSQTASSLC ISSRSESVWT TTPRSNWEIY
60 70 80 90 100
HKPIIIMSVG AAILLFGVAI TCVAYILDES QAQKVVQVLR MIGPAFLSLG
110 120 130
LMMLVCGLVW VPIIKKKQKQ RQKSNFFQSL KFFLLNR
Length:137
Mass (Da):15,427
Last modified:April 20, 2010 - v1
Checksum:i3CA644E1AC4A8227
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07029830 Genomic DNA. No translation available.
CH473948 Genomic DNA. Translation: EDM04772.1.
RefSeqiNP_001102502.1. NM_001109032.1.
XP_017452942.1. XM_017597453.1.
UniGeneiRn.214533.

Genome annotation databases

EnsembliENSRNOT00000057503; ENSRNOP00000054311; ENSRNOG00000037852.
GeneIDi497929.
KEGGirno:497929.
UCSCiRGD:1565284. rat.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiD4A4M4_RAT
AccessioniPrimary (citable) accession number: D4A4M4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 5, 2017
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported