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Protein
Submitted name:

Phosphoinositide-interacting regulator of transient receptor potential channels

Gene

Pirt

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphoinositide-interacting regulator of transient receptor potential channelsImported
Submitted name:
Similar to RIKEN cDNA A530088H08 gene (Predicted)Imported
Gene namesi
Name:PirtImported
Synonyms:RGD1565284_predictedImported
ORF Names:rCG_33146Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi1565284 Pirt

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei54 – 77HelicalSequence analysisAdd BLAST24
Transmembranei89 – 113HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSRNOG00000037852

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000054311

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IWQ6 Eukaryota
ENOG410YYIW LUCA
GeneTreeiENSGT00390000016891
OMAiVWIPIIR
OrthoDBiEOG091G0ZPU
TreeFamiTF328608

Family and domain databases

InterProiView protein in InterPro
IPR028068 PIRT
PfamiView protein in Pfam
PF15099 PIRT, 1 hit

Sequencei

Sequence statusi: Complete.

D4A4M4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVLPKALEV DERSPESKDL LPSQTASSLC ISSRSESVWT TTPRSNWEIY
60 70 80 90 100
HKPIIIMSVG AAILLFGVAI TCVAYILDES QAQKVVQVLR MIGPAFLSLG
110 120 130
LMMLVCGLVW VPIIKKKQKQ RQKSNFFQSL KFFLLNR
Length:137
Mass (Da):15,427
Last modified:April 20, 2010 - v1
Checksum:i3CA644E1AC4A8227
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07029830 Genomic DNA No translation available.
CH473948 Genomic DNA Translation: EDM04772.1
RefSeqiNP_001102502.1, NM_001109032.1
XP_017452942.1, XM_017597453.1
UniGeneiRn.214533

Genome annotation databases

EnsembliENSRNOT00000057503; ENSRNOP00000054311; ENSRNOG00000037852
GeneIDi497929
KEGGirno:497929
UCSCiRGD:1565284 rat

Similar proteinsi

Entry informationi

Entry nameiD4A4M4_RAT
AccessioniPrimary (citable) accession number: D4A4M4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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