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D4A197

- D4A197_RAT

UniProt

D4A197 - D4A197_RAT

Protein
Submitted name:

Methylmalonyl CoA epimerase (Predicted), isoform CRA_d

Gene

Mcee

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. methylmalonyl-CoA epimerase activity Source: Ensembl

    GO - Biological processi

    1. L-methylmalonyl-CoA metabolic process Source: Ensembl

    Enzyme and pathway databases

    ReactomeiREACT_209728. Propionyl-CoA catabolism.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Methylmalonyl CoA epimerase (Predicted), isoform CRA_dImported
    Submitted name:
    Protein MceeImported
    Gene namesi
    Name:MceeImported
    Synonyms:Mcee_predictedImported
    ORF Names:rCG_24795Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 1

    Organism-specific databases

    RGDi1309966. Mcee.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrion Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000004772.
    KOiK05606.
    OMAiEKSPIAG.
    OrthoDBiEOG7WQ7VF.
    TreeFamiTF313417.

    Family and domain databases

    Gene3Di3.10.180.10. 1 hit.
    InterProiIPR029068. Glyas_Bleomycin-R_OHBP_Dase.
    IPR017515. MeMalonyl-CoA_epimerase.
    [Graphical view]
    SUPFAMiSSF54593. SSF54593. 1 hit.
    TIGRFAMsiTIGR03081. metmalonyl_epim. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D4A197-1 [UniParc]FASTAAdd to Basket

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    MRLVVKAAAL AAGATGLFSR VQTPVAAGRS FSTSPSQHQA SSPVWKLGRL    50
    NHVAIAVPDL EKASSFYRDV LGAQVSEAVP LPEHGVSVVF VNLGNTKMEL 100
    LHPLGSDSPI AGFLQKNKAG GMHHVCIEVD NINAAVMDLK KQKIRSLSDE 150
    AKIGAHGKPV IFLHPKDCGG VLVELEQA 178
    Length:178
    Mass (Da):18,816
    Last modified:April 20, 2010 - v1
    Checksum:i0105C922D29D0AA0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06005967 Genomic DNA. No translation available.
    CH473980 Genomic DNA. Translation: EDM08394.1.
    RefSeqiNP_001099811.1. NM_001106341.1.
    UniGeneiRn.3420.

    Genome annotation databases

    EnsembliENSRNOT00000021884; ENSRNOP00000021884; ENSRNOG00000016327.
    GeneIDi293829.
    KEGGirno:293829.
    UCSCiRGD:1309966. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06005967 Genomic DNA. No translation available.
    CH473980 Genomic DNA. Translation: EDM08394.1 .
    RefSeqi NP_001099811.1. NM_001106341.1.
    UniGenei Rn.3420.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000021884 ; ENSRNOP00000021884 ; ENSRNOG00000016327 .
    GeneIDi 293829.
    KEGGi rno:293829.
    UCSCi RGD:1309966. rat.

    Organism-specific databases

    CTDi 84693.
    RGDi 1309966. Mcee.

    Phylogenomic databases

    GeneTreei ENSGT00390000004772.
    KOi K05606.
    OMAi EKSPIAG.
    OrthoDBi EOG7WQ7VF.
    TreeFami TF313417.

    Enzyme and pathway databases

    Reactomei REACT_209728. Propionyl-CoA catabolism.

    Miscellaneous databases

    NextBioi 637090.
    PROi D4A197.

    Family and domain databases

    Gene3Di 3.10.180.10. 1 hit.
    InterProi IPR029068. Glyas_Bleomycin-R_OHBP_Dase.
    IPR017515. MeMalonyl-CoA_epimerase.
    [Graphical view ]
    SUPFAMi SSF54593. SSF54593. 1 hit.
    TIGRFAMsi TIGR03081. metmalonyl_epim. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD4A197_RAT
    AccessioniPrimary (citable) accession number: D4A197
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3