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D4A0R5

- D4A0R5_RAT

UniProt

D4A0R5 - D4A0R5_RAT

Protein
Submitted name:

Protein Slc35e2b

Gene

Slc35e2b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Slc35e2bImported
    Submitted name:
    Solute carrier family 35, member E2 (Predicted)Imported
    Gene namesi
    Name:Slc35e2bImported
    Synonyms:Slc35e2_predictedImported
    ORF Names:rCG_30698Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 5

    Organism-specific databases

    RGDi1309076. Slc35e2b.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00530000063705.
    KOiK15284.
    OMAiIYLTLWF.
    OrthoDBiEOG75TMC4.
    TreeFamiTF331257.

    Family and domain databases

    InterProiIPR000620. DMT.
    IPR004853. Tpt_PEP_trans_dom.
    [Graphical view]
    PfamiPF00892. EamA. 1 hit.
    PF03151. TPT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4A0R5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSAAKSQVL EETAPGCEEE PKGKTLFTWG SLFGHRSEKI VFTKGDGSPE    50
    ESLLTVTITE TTVIESDLGV WSSRALIYLT LWFFFSFCTL FLNKYILSLL 100
    EGEPSMLGAV QMLSTTLIGC VKIFVPCCLY QHKTRLSYPP NFIMTMLFVG 150
    LMRFATVVLG LVSLKNVAVS FAETVKSSAP IFTVIMSRMI LGEYTGLLVN 200
    LSLIPVMGGL ALCTATEISF NILGFSAALS TNIMDCLQNV FSKKLLSGDK 250
    YRFSAPELQF YTSAAAVALL IPAWTFFMDV PVIGGSGKSF SYSQDIVLLL 300
    LTDGALFHLQ SVTAYALMGK ISPVTFSVAS TVKHALSIWL SIIVFGNKIT 350
    SLSAIGTILV TVGVLLYNKA RQYQQETMQS LVTATSQGPN DDTEPLVSQD 400
    SRQHH 405
    Length:405
    Mass (Da):44,138
    Last modified:April 20, 2010 - v1
    Checksum:iA1EAD15120F26EF6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06041318 Genomic DNA. No translation available.
    CH473968 Genomic DNA. Translation: EDL81309.1.
    RefSeqiNP_001101468.1. NM_001107998.1.
    XP_006239634.1. XM_006239572.1.
    UniGeneiRn.158991.

    Genome annotation databases

    EnsembliENSRNOT00000023097; ENSRNOP00000023097; ENSRNOG00000017075.
    GeneIDi313765.
    KEGGirno:313765.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06041318 Genomic DNA. No translation available.
    CH473968 Genomic DNA. Translation: EDL81309.1 .
    RefSeqi NP_001101468.1. NM_001107998.1.
    XP_006239634.1. XM_006239572.1.
    UniGenei Rn.158991.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000023097 ; ENSRNOP00000023097 ; ENSRNOG00000017075 .
    GeneIDi 313765.
    KEGGi rno:313765.

    Organism-specific databases

    CTDi 728661.
    RGDi 1309076. Slc35e2b.

    Phylogenomic databases

    GeneTreei ENSGT00530000063705.
    KOi K15284.
    OMAi IYLTLWF.
    OrthoDBi EOG75TMC4.
    TreeFami TF331257.

    Miscellaneous databases

    NextBioi 666772.
    PROi D4A0R5.

    Family and domain databases

    InterProi IPR000620. DMT.
    IPR004853. Tpt_PEP_trans_dom.
    [Graphical view ]
    Pfami PF00892. EamA. 1 hit.
    PF03151. TPT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD4A0R5_RAT
    AccessioniPrimary (citable) accession number: D4A0R5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3