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D4A0R5

- D4A0R5_RAT

UniProt

D4A0R5 - D4A0R5_RAT

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Protein
Submitted name:

Protein Slc35e2b

Gene
Slc35e2b, Slc35e2_predicted, rCG_30698
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Slc35e2bImported
Submitted name:
Solute carrier family 35, member E2 (Predicted)Imported
Gene namesi
Name:Slc35e2bImported
Synonyms:Slc35e2_predictedImported
ORF Names:rCG_30698Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 5

Organism-specific databases

RGDi1309076. Slc35e2b.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00530000063705.
KOiK15284.
OMAiIYLTLWF.
OrthoDBiEOG75TMC4.
TreeFamiTF331257.

Family and domain databases

InterProiIPR000620. DMT.
IPR004853. Tpt_PEP_trans_dom.
[Graphical view]
PfamiPF00892. EamA. 1 hit.
PF03151. TPT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4A0R5-1 [UniParc]FASTAAdd to Basket

« Hide

MSSAAKSQVL EETAPGCEEE PKGKTLFTWG SLFGHRSEKI VFTKGDGSPE    50
ESLLTVTITE TTVIESDLGV WSSRALIYLT LWFFFSFCTL FLNKYILSLL 100
EGEPSMLGAV QMLSTTLIGC VKIFVPCCLY QHKTRLSYPP NFIMTMLFVG 150
LMRFATVVLG LVSLKNVAVS FAETVKSSAP IFTVIMSRMI LGEYTGLLVN 200
LSLIPVMGGL ALCTATEISF NILGFSAALS TNIMDCLQNV FSKKLLSGDK 250
YRFSAPELQF YTSAAAVALL IPAWTFFMDV PVIGGSGKSF SYSQDIVLLL 300
LTDGALFHLQ SVTAYALMGK ISPVTFSVAS TVKHALSIWL SIIVFGNKIT 350
SLSAIGTILV TVGVLLYNKA RQYQQETMQS LVTATSQGPN DDTEPLVSQD 400
SRQHH 405
Length:405
Mass (Da):44,138
Last modified:April 20, 2010 - v1
Checksum:iA1EAD15120F26EF6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06041318 Genomic DNA. No translation available.
CH473968 Genomic DNA. Translation: EDL81309.1.
RefSeqiNP_001101468.1. NM_001107998.1.
XP_006239634.1. XM_006239572.1.
UniGeneiRn.158991.

Genome annotation databases

EnsembliENSRNOT00000023097; ENSRNOP00000023097; ENSRNOG00000017075.
GeneIDi313765.
KEGGirno:313765.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06041318 Genomic DNA. No translation available.
CH473968 Genomic DNA. Translation: EDL81309.1 .
RefSeqi NP_001101468.1. NM_001107998.1.
XP_006239634.1. XM_006239572.1.
UniGenei Rn.158991.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000023097 ; ENSRNOP00000023097 ; ENSRNOG00000017075 .
GeneIDi 313765.
KEGGi rno:313765.

Organism-specific databases

CTDi 728661.
RGDi 1309076. Slc35e2b.

Phylogenomic databases

GeneTreei ENSGT00530000063705.
KOi K15284.
OMAi IYLTLWF.
OrthoDBi EOG75TMC4.
TreeFami TF331257.

Miscellaneous databases

NextBioi 666772.
PROi D4A0R5.

Family and domain databases

InterProi IPR000620. DMT.
IPR004853. Tpt_PEP_trans_dom.
[Graphical view ]
Pfami PF00892. EamA. 1 hit.
PF03151. TPT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4A0R5_RAT
AccessioniPrimary (citable) accession number: D4A0R5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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