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Protein
Submitted name:

Protein Slc35e2b

Gene

Slc35e2b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Slc35e2bImported
Submitted name:
Solute carrier family 35, member E2 (Predicted)Imported
Gene namesi
Name:Slc35e2bImported
Synonyms:Slc35e2_predictedImported
ORF Names:rCG_30698Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1309076. Slc35e2b.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei75 – 97HelicalSequence analysisAdd BLAST23
Transmembranei109 – 130HelicalSequence analysisAdd BLAST22
Transmembranei142 – 162HelicalSequence analysisAdd BLAST21
Transmembranei194 – 212HelicalSequence analysisAdd BLAST19
Transmembranei218 – 237HelicalSequence analysisAdd BLAST20
Transmembranei258 – 277HelicalSequence analysisAdd BLAST20
Transmembranei297 – 317HelicalSequence analysisAdd BLAST21
Transmembranei351 – 368HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiD4A0R5.

PTM databases

PhosphoSitePlusiD4A0R5.

Expressioni

Gene expression databases

BgeeiENSRNOG00000017075.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023097.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini74 – 368TPTInterPro annotationAdd BLAST295

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1441. Eukaryota.
ENOG410XP1S. LUCA.
GeneTreeiENSGT00530000063705.
KOiK15284.
OMAiIYLTLWF.
OrthoDBiEOG091G0C5E.
PhylomeDBiD4A0R5.
TreeFamiTF331257.

Family and domain databases

InterProiIPR004853. Sugar_P_trans_dom.
[Graphical view]
PfamiPF03151. TPT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4A0R5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSAAKSQVL EETAPGCEEE PKGKTLFTWG SLFGHRSEKI VFTKGDGSPE
60 70 80 90 100
ESLLTVTITE TTVIESDLGV WSSRALIYLT LWFFFSFCTL FLNKYILSLL
110 120 130 140 150
EGEPSMLGAV QMLSTTLIGC VKIFVPCCLY QHKTRLSYPP NFIMTMLFVG
160 170 180 190 200
LMRFATVVLG LVSLKNVAVS FAETVKSSAP IFTVIMSRMI LGEYTGLLVN
210 220 230 240 250
LSLIPVMGGL ALCTATEISF NILGFSAALS TNIMDCLQNV FSKKLLSGDK
260 270 280 290 300
YRFSAPELQF YTSAAAVALL IPAWTFFMDV PVIGGSGKSF SYSQDIVLLL
310 320 330 340 350
LTDGALFHLQ SVTAYALMGK ISPVTFSVAS TVKHALSIWL SIIVFGNKIT
360 370 380 390 400
SLSAIGTILV TVGVLLYNKA RQYQQETMQS LVTATSQGPN DDTEPLVSQD

SRQHH
Length:405
Mass (Da):44,138
Last modified:April 20, 2010 - v1
Checksum:iA1EAD15120F26EF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC105662 Genomic DNA. No translation available.
CH473968 Genomic DNA. Translation: EDL81309.1.
RefSeqiNP_001101468.1. NM_001107998.1.
XP_006239634.1. XM_006239572.3.
UniGeneiRn.158991.

Genome annotation databases

EnsembliENSRNOT00000023097; ENSRNOP00000023097; ENSRNOG00000017075.
GeneIDi313765.
KEGGirno:313765.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC105662 Genomic DNA. No translation available.
CH473968 Genomic DNA. Translation: EDL81309.1.
RefSeqiNP_001101468.1. NM_001107998.1.
XP_006239634.1. XM_006239572.3.
UniGeneiRn.158991.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023097.

PTM databases

PhosphoSitePlusiD4A0R5.

Proteomic databases

PeptideAtlasiD4A0R5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000023097; ENSRNOP00000023097; ENSRNOG00000017075.
GeneIDi313765.
KEGGirno:313765.

Organism-specific databases

CTDi728661.
RGDi1309076. Slc35e2b.

Phylogenomic databases

eggNOGiKOG1441. Eukaryota.
ENOG410XP1S. LUCA.
GeneTreeiENSGT00530000063705.
KOiK15284.
OMAiIYLTLWF.
OrthoDBiEOG091G0C5E.
PhylomeDBiD4A0R5.
TreeFamiTF331257.

Gene expression databases

BgeeiENSRNOG00000017075.

Family and domain databases

InterProiIPR004853. Sugar_P_trans_dom.
[Graphical view]
PfamiPF03151. TPT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD4A0R5_RAT
AccessioniPrimary (citable) accession number: D4A0R5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 2, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.