Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Protein Zfpm2

Gene

Zfpm2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_275619. Factors involved in megakaryocyte development and platelet production.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Zfpm2Imported
Gene namesi
Name:Zfpm2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1306021. Zfpm2.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: Ensembl
  • nucleus Source: RGD
Complete GO annotation...

Expressioni

Gene expression databases

GenevisibleiD4A0R1. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000035072.

Family & Domainsi

Phylogenomic databases

InParanoidiD4A0R1.
OMAiIYSPLMP.
OrthoDBiEOG74TWXR.
TreeFamiTF331342.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 8 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4A0R1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
FCYIPGDDEG IQEPAESDGD SHSDKPGQPG VETDDWDGPG ELEVFQRDGE
60 70 80 90 100
RKIQSRQQLP VGTTWGPFAG KMDLNNNSLK TKAQVSMVLT AGPKWLLDVT
110 120 130 140 150
WQGVEDSKNN CIVYSKGGQL WCTTTKAISE GEELIAFVVD FDSRLQTASQ
160 170 180 190 200
MTLTEGMYPA RLLDSIQLLP QQAAMASILP TAIVNKDIFP CKSCGIWYRS
210 220 230 240 250
ERNLQAHLMY YCSGRQREAA PVSEENEDST HQISSLCPFP QCTKSFSNAR
260 270 280 290 300
ALEMHLTSHS GVKMEEFLPP GASLKCTVCS YTADSVINFH QHLFSHLTQA
310 320 330 340 350
AFRCNHCHFG FQTQRELLQH QELHVPGGKL PRESDMEHSP SGTEDSLQPA
360 370 380 390 400
TDLLARSDLS QSQKAMPTKD ASSDTELDKC EKKTQLFLTN QRPEMQPAAN
410 420 430 440 450
KQNFSYTKIK SEPSSPRLAS SPVQPNLGPS FPVGPFLSQF AFPQDITMVP
460 470 480 490 500
QASEILAKMS ELVHRRLRHG SSSYPPVIYS PLMPKGATCF ECNITFNNLD
510 520 530 540 550
NYLVHKKHYC SSRWQQMAKS PEFPSVSEKI PEALSPNTGQ TSINLLNPAA
560 570 580 590 600
HPPDPENPLL QTSCINSSTV LDLIGPNGKG HEKDFSTQAK KLPTSNNNDD
610 620 630 640 650
KINGKPVDVK NPSGPLVDGE SDPNKTTCEA CNITFSRHET YMVHKQYYCA
660 670 680 690 700
TRHDPPLKRS ASNKVPAMQR TMRTRKRRKM YEMCLPEQEQ RPPLVQQRFL
710 720 730 740 750
DVANLSNPCS STQEPTEGLG ECYHPRCDIF PGIVSKHLET SLAINKCVPV
760 770 780 790 800
PKCDTTHSSV SCLEMDVPID LSKKCLSQSE RTTASPKRLL DYHECTVCKI
810 820 830 840 850
SFNKVENYLA HKQNFCPVTA HQRNDLGQLD GKVFPNPESE RNSPEVSFER
860 870 880 890 900
NMIKCEKNGN PKQPSPNGNL FSSHLATLQG LKVFSEAAQL IATKEENKHL
910 920 930 940 950
FLPQCLYPGA IKKTKGADQL SPYYGIKPSD YIAGSLVIHN TDVEQNTNTE
960 970 980 990 1000
NESPKGQASS NGCAVPKKDS LPLLPKNRGM VIVNGGLKQD ERPTANPQQE
1010 1020 1030 1040 1050
NISQNAQHED GHKSPSWISE NPLAANENVS PGIPCAEEQL SSIAKGVNGS
1060 1070 1080 1090
TQAPSSGKYC RLCDIQFNNL SNFITHKKFY CSSHAAEHVK
Length:1,090
Mass (Da):120,779
Last modified:July 22, 2015 - v3
Checksum:i2013AF68E5D0C95F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057593 Genomic DNA. No translation available.
AABR07057594 Genomic DNA. No translation available.
AABR07057595 Genomic DNA. No translation available.
AABR07057596 Genomic DNA. No translation available.
AABR07057597 Genomic DNA. No translation available.
AABR07057598 Genomic DNA. No translation available.
AABR07057599 Genomic DNA. No translation available.
AABR07057600 Genomic DNA. No translation available.
AABR07057601 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000029419; ENSRNOP00000035072; ENSRNOG00000004109.
UCSCiRGD:1306021. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057593 Genomic DNA. No translation available.
AABR07057594 Genomic DNA. No translation available.
AABR07057595 Genomic DNA. No translation available.
AABR07057596 Genomic DNA. No translation available.
AABR07057597 Genomic DNA. No translation available.
AABR07057598 Genomic DNA. No translation available.
AABR07057599 Genomic DNA. No translation available.
AABR07057600 Genomic DNA. No translation available.
AABR07057601 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000035072.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000029419; ENSRNOP00000035072; ENSRNOG00000004109.
UCSCiRGD:1306021. rat.

Organism-specific databases

RGDi1306021. Zfpm2.

Phylogenomic databases

InParanoidiD4A0R1.
OMAiIYSPLMP.
OrthoDBiEOG74TWXR.
TreeFamiTF331342.

Enzyme and pathway databases

ReactomeiREACT_275619. Factors involved in megakaryocyte development and platelet production.

Miscellaneous databases

NextBioi668387.

Gene expression databases

GenevisibleiD4A0R1. RN.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 8 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4A0R1_RAT
AccessioniPrimary (citable) accession number: D4A0R1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: July 22, 2015
This is version 48 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.