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Protein
Submitted name:

Protein Ehmt1

Gene

Ehmt1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • response to fungicide Source: RGD
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_324145. Senescence-Associated Secretory Phenotype (SASP).
REACT_351210. PKMTs methylate histone lysines.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Ehmt1Imported
Gene namesi
Name:Ehmt1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1307588. Ehmt1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

Expressioni

Gene expression databases

GenevisibleiD4A005. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063511.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 pre-SET domain.
Contains 7 ANK repeats.UniRule annotation

Keywords - Domaini

ANK repeatUniRule annotation, RepeatUniRule annotation

Phylogenomic databases

InParanoidiD4A005.
OMAiDHRARMV.
OrthoDBiEOG744T8D.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00023. Ank. 1 hit.
PF12796. Ank_2. 2 hits.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
PRINTSiPR01415. ANKYRIN.
SMARTiSM00248. ANK. 7 hits.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 5 hits.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4A005-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QQAVLAKQET KQDCCMKTEL LREDTLMAAD EGSTEKQAGE TPMAADGETN
60 70 80 90 100
GSCEKSGDIS HPNAPKHTQE NTRASPQEGT NRVSRVAENG VSERDTEVGK
110 120 130 140 150
QNHVTADDFM QTSVIGSNGY FLNKPALQGQ PLRTPNTLNS SLPGHAAKTL
160 170 180 190 200
PGGASKCRTP SALPQTPTTA PTVPGEGSAD TEDRKPTASG TDVRVHRARK
210 220 230 240 250
TMPKSILGLH AASKDHREVQ DHKEPKEDIN RNISECGRQQ LLPTFPALHQ
260 270 280 290 300
SLPQNQCYMA TTKSQTACLP FVLAAAVSRK KKRRMGTYSL VPKKKTKVLK
310 320 330 340 350
QRTVIEMFKS ITHSTVGAKG EKVLDDSALH VNGESLEMDS EEEDSEELED
360 370 380 390 400
EEDRGAEQAA AFPTEDSRTS KESMSETDRA AKSSESSIKK KFLKRRGKTD
410 420 430 440 450
SPWIKPARKR RRRSRKKPSS MLGSEACKSS PGSMEQAALG DSAGYMEVSL
460 470 480 490 500
DSLDLRVRGI LSSQTENEGL ANGPDVLETD GLHEVPLCSC RMETPKSREI
510 520 530 540 550
STLANNQCMA TESVDHELGR CTNSVVKYEL MRPSNKAPLL VLCEDHRGRM
560 570 580 590 600
VKHQCCPGCG YFCTAGNFME CQPESSISHR FHKDCASRVN NASYCPHCGE
610 620 630 640 650
ETSKAKEVTI AKADTTSTVT LAPGQEKSLA AEGRADTTTG SIAGAPEDEK
660 670 680 690 700
SQSTVTQAPE CFDPAGPAGF VRPTSGFSQG PGKETLESAL IALDSEKPKK
710 720 730 740 750
LRFHPKQLYF SARQGELQKV LLMLVDGIDP NFKMEHQSKR SPLHAAAEAG
760 770 780 790 800
HVDICHMLVQ AGANIDTCSE DQRTPLMEAA ENNHLDAVKY LIKAGAQVDP
810 820 830 840 850
KDAEGSTCLH LAAKKGHYDV VQYLLSNGQM DVNCQDDGGW TPMIWATEYK
860 870 880 890 900
HVDLVKLLLS KGSDINIRDN EENICLHWAA FSGCVDIAEI LLAAKCDLHA
910 920 930 940 950
VNIHGDSPLH IAARENRYDC VVLFLSRDSD VTLKNKEGET PLQCASLNSQ
960 970 980 990 1000
VWSALQMSKA LQDSAPDKPV AVEKTVSRDI ARGYERIPIP CVNAVDSELC
1010 1020 1030 1040 1050
PTNYKYVSQN CVTSPMNIDR NITHLQYCVC VDDCSSSTCM CGQLSMRCWY
1060 1070 1080 1090 1100
DKDGRLLPEF NMAEPPLIFE CNHACSCWRN CRNRVVQNGL RARLQLYRTQ
1110 1120 1130 1140 1150
DMGWGVRSLQ DIPLGTFVCE YVGELISDSE ADVREEDSYL FDLDNKDGEV
1160 1170 1180 1190 1200
YCIDARFYGN VSRFINHHCE PNLVPVRVFM SHQDLRFPRI AFFSTRLIQA
1210 1220 1230 1240 1250
GEQLGFDYGE RFWDVKGKLF SCRCGSPKCR HSSAALAQRQ ASAAQEAQEN
1260
GLPDTSSAAA ADPL
Length:1,264
Mass (Da):138,909
Last modified:July 22, 2015 - v3
Checksum:iB0ADC197BA44AA1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07051230 Genomic DNA. No translation available.
AABR07051231 Genomic DNA. No translation available.
AABR07051232 Genomic DNA. No translation available.
AABR07051233 Genomic DNA. No translation available.
AABR07051234 Genomic DNA. No translation available.
AABR07051235 Genomic DNA. No translation available.
AABR07051236 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000066777; ENSRNOP00000063511; ENSRNOG00000007242.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07051230 Genomic DNA. No translation available.
AABR07051231 Genomic DNA. No translation available.
AABR07051232 Genomic DNA. No translation available.
AABR07051233 Genomic DNA. No translation available.
AABR07051234 Genomic DNA. No translation available.
AABR07051235 Genomic DNA. No translation available.
AABR07051236 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063511.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000066777; ENSRNOP00000063511; ENSRNOG00000007242.

Organism-specific databases

RGDi1307588. Ehmt1.

Phylogenomic databases

InParanoidiD4A005.
OMAiDHRARMV.
OrthoDBiEOG744T8D.

Enzyme and pathway databases

ReactomeiREACT_324145. Senescence-Associated Secretory Phenotype (SASP).
REACT_351210. PKMTs methylate histone lysines.

Miscellaneous databases

NextBioi678572.

Gene expression databases

GenevisibleiD4A005. RN.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00023. Ank. 1 hit.
PF12796. Ank_2. 2 hits.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
PRINTSiPR01415. ANKYRIN.
SMARTiSM00248. ANK. 7 hits.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 5 hits.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD4A005_RAT
AccessioniPrimary (citable) accession number: D4A005
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: July 22, 2015
This is version 49 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.