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Protein
Submitted name:

Catenin (Cadherin associated protein), delta 1 (Predicted), isoform CRA_a

Gene

Ctnnd1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-418990 Adherens junctions interactions
R-RNO-5218920 VEGFR2 mediated vascular permeability

Names & Taxonomyi

Protein namesi
Submitted name:
Catenin (Cadherin associated protein), delta 1 (Predicted), isoform CRA_aImported
Submitted name:
Catenin delta 1Imported
Gene namesi
Name:Ctnnd1Imported
Synonyms:Ctnnd1_predictedImported
ORF Names:rCG_26679Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1305643 Ctnnd1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PeptideAtlasiD3ZZZ9
PRIDEiD3ZZZ9

Expressioni

Gene expression databases

BgeeiENSRNOG00000030790

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063519

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati408 – 445ARMPROSITE-ProRule annotationAdd BLAST38
Repeati451 – 494ARMPROSITE-ProRule annotationAdd BLAST44
Repeati704 – 741ARMPROSITE-ProRule annotationAdd BLAST38

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili13 – 36Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1048 Eukaryota
ENOG410Y21Q LUCA
GeneTreeiENSGT00760000119167
KOiK05690
OMAiHSYDDST
OrthoDBiEOG091G018C

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR000225 Armadillo
IPR028439 Catenin_d1
IPR028435 Plakophilin/d_Catenin
PANTHERiPTHR10372 PTHR10372, 1 hit
PTHR10372:SF6 PTHR10372:SF6, 1 hit
PfamiView protein in Pfam
PF00514 Arm, 3 hits
SMARTiView protein in SMART
SM00185 ARM, 7 hits
SUPFAMiSSF48371 SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50176 ARM_REPEAT, 3 hits

Sequencei

Sequence statusi: Complete.

D3ZZZ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDSEVESTA SILASVKEQE AQFEKLTRAL EEERRHVSAQ LERVRVSPQD
60 70 80 90 100
ANSLMANGTL TRRHQNGRFV GDADLERQKF SDLKLNGPQD HNHLLYSTIP
110 120 130 140 150
RMQEPGQIVE TYTEEDPEGA MSVVSVETSD DGTTRRTETT VKKVVKTMTT
160 170 180 190 200
RTVQPVPMGP DGLPVDASAV SNNYIQTLGR DFRKNGNGGP GPYVGQAGTA
210 220 230 240 250
TLPRNFHYPP DGYGRHYEDG YPGGSDNYGS LSRVTRIEER YRPSMEGYRA
260 270 280 290 300
PSRQDVYGPQ PQVRVGGSSV DLHRFHPEPY GLEDDQRSMG YDDLDYGMMS
310 320 330 340 350
DYGTARRTGT PSDPRRRLRS YEDMIGEEVP PDQYYWAPLA QHERGSLASL
360 370 380 390 400
DSLRKGMPPP PNWRQPELPE VIAMLGFRLD AVKSNAAAYL QHLCYRNDKV
410 420 430 440 450
KTDVRKLKGI PILVGLLDHP KKEVHLGACG ALKNISFGRD QDNKIAIKNC
460 470 480 490 500
DGVPALVRLL RKARDMDLTE VITGTLWNLS SHDSIKMEIV DHALHALTDE
510 520 530 540 550
VIIPHSGWER EPNEDCKPRH IEWESVLTNT AGCLRNVSSE RSEARRKLRE
560 570 580 590 600
CDGLVDALIF IVQAEIGQKD SDSKLVENCV CLLRNLSYQV HREIPQAERY
610 620 630 640 650
QEALPSVANS TGPHAASCFG AKKGKGKKPT EDPANDTVDF PKRTSPARGY
660 670 680 690 700
ELLFQPEVVR IYISLLKESK TPAILEASAG AIQNLCAGRW TYGRYIRSAL
710 720 730 740 750
RQEKALSAIA DLLTSEHERV VKAASGALRN LAVDARNKEL IGKHAIPNLV
760 770 780 790 800
KNLPGGQQNS SWNFSEDTVV SILNTINEVI AENLEAAKKL RETQGIEKLV
810 820 830 840 850
LINKSGNRSE KEVRAAALVL QTIWGYKELR KPLEKEGWKK SDFQVNLNNA
860 870 880 890 900
SRSQSSHSYD DSTLPLIDRN QKSDKKPDRE EIPMSNMGSN TKSLDNNYST
910 920 930
LNERGDHNRT LDRSGDLGDM EPLKGAPLMQ KI
Length:932
Mass (Da):104,072
Last modified:April 20, 2010 - v1
Checksum:iB54E38D0A577E265
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07052751 Genomic DNA No translation available.
AABR07072882 Genomic DNA No translation available.
CH473949 Genomic DNA Translation: EDL79305.1
RefSeqiNP_001101210.1, NM_001107740.1
UniGeneiRn.9435

Genome annotation databases

EnsembliENSRNOT00000064009; ENSRNOP00000063519; ENSRNOG00000030790
ENSRNOT00000081400; ENSRNOP00000070326; ENSRNOG00000030790
GeneIDi311163
KEGGirno:311163

Similar proteinsi

Entry informationi

Entry nameiD3ZZZ9_RAT
AccessioniPrimary (citable) accession number: D3ZZZ9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health