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Protein
Submitted name:

Phosphatidylinositol glycan anchor biosynthesis, class F

Gene

Pigf

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-162710 Synthesis of glycosylphosphatidylinositol (GPI)

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphatidylinositol glycan anchor biosynthesis, class FImported
Gene namesi
Name:PigfImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi1584658 Pigf

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 30HelicalSequence analysisAdd BLAST22
Transmembranei42 – 62HelicalSequence analysisAdd BLAST21
Transmembranei83 – 101HelicalSequence analysisAdd BLAST19
Transmembranei113 – 135HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiD3ZZU7

Expressioni

Gene expression databases

BgeeiENSRNOG00000015325

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020600

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3144 Eukaryota
ENOG4111B1J LUCA
GeneTreeiENSGT00390000016617
InParanoidiD3ZZU7
OMAiFSVYGTH
OrthoDBiEOG091G0HMT
TreeFamiTF323878

Family and domain databases

InterProiView protein in InterPro
IPR009580 GPI_biosynthesis_protein_Pig-F
PfamiView protein in Pfam
PF06699 PIG-F, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZZU7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDTDIKRLL YTNLLCIFSV FLSIFIPSFF LDNFSILETH LVWLGTCSAF
60 70 80 90 100
VTGANLLLYL VVKPNVSSKR SSLSHKVARV VRCWLYFLAS CFFLHIIFVL
110 120 130 140 150
YGAPLMELVL ETFLFAVVLS TFTTVPCLCL LGPNLKAWLR VFSRNGVTSV
160 170 180 190 200
WENSLQITTV SSFIGAWLGA FPIPLDWERP WQGTQELTGC QGEPSHSRGE

GIK
Length:203
Mass (Da):22,879
Last modified:July 22, 2015 - v3
Checksum:i41A5D979303FE860
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07062819 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000020600; ENSRNOP00000020600; ENSRNOG00000015325
UCSCiRGD:1584658 rat

Similar proteinsi

Entry informationi

Entry nameiD3ZZU7_RAT
AccessioniPrimary (citable) accession number: D3ZZU7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: May 23, 2018
This is version 61 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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