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Protein
Submitted name:

GRAM domain-containing 1B

Gene

Gramd1b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
GRAM domain-containing 1BImported
Gene namesi
Name:Gramd1bImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi1305443. Gramd1b.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei767 – 787HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiD3ZYJ5.

PTM databases

iPTMnetiD3ZYJ5.
PhosphoSitePlusiD3ZYJ5.

Expressioni

Gene expression databases

BgeeiENSRNOG00000053577.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000009685.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini516 – 687VAStInterPro annotationAdd BLAST172

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1032. Eukaryota.
ENOG410XRQQ. LUCA.
GeneTreeiENSGT00580000081380.
OMAiITHDVPY.
OrthoDBiEOG091G051I.
PhylomeDBiD3ZYJ5.

Family and domain databases

InterProiView protein in InterPro
IPR004182. GRAM.
IPR031968. VASt.
PfamiView protein in Pfam
PF16016. DUF4782. 1 hit.
PF02893. GRAM. 1 hit.
SMARTiView protein in SMART
SM00568. GRAM. 1 hit.
PROSITEiView protein in PROSITE
PS51778. VAST. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZYJ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAANMMENL QLPALQVPEP QGAPEGSAVW SSSSTPTLRR RRFKMRRMKN
60 70 80 90 100
VQEQSLEAGL VAPDLPGVLA PGKEFLQLPS IEITPSSDED TPWSNCSTPS
110 120 130 140 150
ASPRRKRFLL RKWLRVRERK ECSESSSQQS SQQSSHDDDS SRFLSPRVRE
160 170 180 190 200
ESTASNSNRS TPACSPILRK RSRSPTPQNQ DGDTMVEKGS DHSSDKSPST
210 220 230 240 250
PEQGVQRSCS SQSGRSGGKN SKKSQSWYNV LSPTYKQRNE DFRKLFKQLP
260 270 280 290 300
DTERLIVDYS CALQRDILLQ GRLYLSENWI CFYSNIFRWE TLLTVRLKDI
310 320 330 340 350
CSMTKEKTAR LIPNAIQVCT DSEKHFFTSF GARDRTYMMM FRLWQNALLE
360 370 380 390 400
KPLCPKELWH FVHQCYGNEL GLTSDDEDYV PPDDDFNTMG YCEEIPIEEN
410 420 430 440 450
EVNDSSSKSS IETKPDASPQ LPKKSITNST LTSTGSSEAP VSFDGLPLEE
460 470 480 490 500
EVMEGDGSLE KELAIDNIIG EKIEIMAPVT SPSLDFNDNE DIPTELSDSS
510 520 530 540 550
DTHDEGEVQA FYEDLSGRQY VNEVFNFSVD KLYDLLFTTS PFLRDFMEQR
560 570 580 590 600
RFSDIIFHPW KKEENGNQSR VILYTITLTN PLAPKTATVR ETQTMYKASQ
610 620 630 640 650
ESECYVIDAE VLTHDVPYHD YFYTINRYTL TRVARNKSRL RVSTELRYRK
660 670 680 690 700
QPWGFVKTFI EKNFWSGLED YFRHLETELT KTESTYLAEI HRQSPKEKTN
710 720 730 740 750
KSSAVRRRKR PHAHLRVPHL EEVMSPVTTP TDEDVGHRIK HVAGSTQTRH
760 770 780 790 800
IPEDTPDGFH LQSVSKLLLV ISCVLVLLVI LNMMLFYKLW MLEYTTQTLT
810 820 830 840 850
AWQGLRLQER LPQSQTEWAQ LLESQQKYHD TELQRWREII KSSVMLLDQM
860 870
KDSLINLQNG IRSRDYTAES DEKRNRYH
Length:878
Mass (Da):101,204
Last modified:April 20, 2010 - v1
Checksum:i396FB126E39D61DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07069982 Genomic DNA. No translation available.
AABR07069983 Genomic DNA. No translation available.
AABR07069984 Genomic DNA. No translation available.
AABR07069985 Genomic DNA. No translation available.
AABR07069986 Genomic DNA. No translation available.
RefSeqiNP_001178545.1. NM_001191616.1.
UniGeneiRn.204239.

Genome annotation databases

EnsembliENSRNOT00000083939; ENSRNOP00000068626; ENSRNOG00000053577.
GeneIDi300644.
KEGGirno:300644.

Similar proteinsi

Entry informationi

Entry nameiD3ZYJ5_RAT
AccessioniPrimary (citable) accession number: D3ZYJ5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 22, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported