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D3ZY64

- D3ZY64_RAT

UniProt

D3ZY64 - D3ZY64_RAT

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Protein
Submitted name:

Protein Ubash3a

Gene
Ubash3a, Ubash3a_predicted, rCG_60588
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. negative regulation of T cell receptor signaling pathway Source: Ensembl
  2. regulation of cytokine production Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Ubash3aImported
Submitted name:
Ubiquitin associated and SH3 domain containing, A (Predicted)Imported
Gene namesi
Name:Ubash3aImported
Synonyms:Ubash3a_predictedImported
ORF Names:rCG_60588Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 20

Organism-specific databases

RGDi1310305. Ubash3a.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000018249.
OMAiHGERCDF.
OrthoDBiEOG7P5T0D.
TreeFamiTF313334.

Family and domain databases

Gene3Di3.40.50.1240. 2 hits.
InterProiIPR013078. His_Pase_superF_clade-1.
IPR029033. His_PPase_superfam.
IPR001452. SH3_domain.
[Graphical view]
PfamiPF00300. His_Phos_1. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
SSF53254. SSF53254. 2 hits.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZY64-1 [UniParc]FASTAAdd to Basket

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MRFVHYQTLK ALFQYKPQNA DELMLSPGDY IFVDPTQQEE ASEGWAIGIS    50
HRTGCRGFLP ENYTERANEA DTWVKHRTYT FSLAMDLNSR KEFEASSRRN 100
GDSHTPSVSR SISDIQALQA TIARRGVLVI RHGERVDQVF GKSWLHQCTT 150
TDGKYYRPDL NFPRSLPRRS NGIKDFENDP PLSSCGIFQA RLAGEALLDS 200
GVRVTAVFAS PALRCVQTAK HILEELKLER RLKIKVEPGI FEWMKWEAGK 250
ATLTFLTLEE LKEADFNVDL DYRPAFPCCS LLPAESYDQY VERCAVSMGQ 300
IINTCPQDMG ITLIVSHSSA LDSCTRPLLG LPPRECGDFA QLVRKIPSLG 350
MCFCEENKED GKWDLVNPPV KTLTHGANSV FNWRNWISSN 390
Length:390
Mass (Da):44,135
Last modified:April 3, 2013 - v2
Checksum:i0A8B254299DF1F9E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06100122 Genomic DNA. No translation available.
CH473988 Genomic DNA. Translation: EDL97007.1.
RefSeqiNP_001101090.1. NM_001107620.1.
UniGeneiRn.85920.

Genome annotation databases

EnsembliENSRNOT00000001541; ENSRNOP00000001541; ENSRNOG00000001167.
GeneIDi309666.
KEGGirno:309666.
UCSCiRGD:1310305. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06100122 Genomic DNA. No translation available.
CH473988 Genomic DNA. Translation: EDL97007.1 .
RefSeqi NP_001101090.1. NM_001107620.1.
UniGenei Rn.85920.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000001541 ; ENSRNOP00000001541 ; ENSRNOG00000001167 .
GeneIDi 309666.
KEGGi rno:309666.
UCSCi RGD:1310305. rat.

Organism-specific databases

CTDi 53347.
RGDi 1310305. Ubash3a.

Phylogenomic databases

GeneTreei ENSGT00390000018249.
OMAi HGERCDF.
OrthoDBi EOG7P5T0D.
TreeFami TF313334.

Miscellaneous databases

NextBioi 35571057.
PROi D3ZY64.

Family and domain databases

Gene3Di 3.40.50.1240. 2 hits.
InterProi IPR013078. His_Pase_superF_clade-1.
IPR029033. His_PPase_superfam.
IPR001452. SH3_domain.
[Graphical view ]
Pfami PF00300. His_Phos_1. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view ]
SMARTi SM00326. SH3. 1 hit.
[Graphical view ]
SUPFAMi SSF50044. SSF50044. 1 hit.
SSF53254. SSF53254. 2 hits.
PROSITEi PS50002. SH3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZY64_RAT
AccessioniPrimary (citable) accession number: D3ZY64
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: September 3, 2014
This is version 30 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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