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D3ZY64

- D3ZY64_RAT

UniProt

D3ZY64 - D3ZY64_RAT

Protein
Submitted name:

Protein Ubash3a

Gene

Ubash3a

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. negative regulation of T cell receptor signaling pathway Source: Ensembl
    2. regulation of cytokine production Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Ubash3aImported
    Submitted name:
    Ubiquitin associated and SH3 domain containing, A (Predicted)Imported
    Gene namesi
    Name:Ubash3aImported
    Synonyms:Ubash3a_predictedImported
    ORF Names:rCG_60588Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 20

    Organism-specific databases

    RGDi1310305. Ubash3a.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000018249.
    OMAiHGERCDF.
    OrthoDBiEOG7P5T0D.
    TreeFamiTF313334.

    Family and domain databases

    Gene3Di3.40.50.1240. 2 hits.
    InterProiIPR013078. His_Pase_superF_clade-1.
    IPR029033. His_PPase_superfam.
    IPR001452. SH3_domain.
    [Graphical view]
    PfamiPF00300. His_Phos_1. 1 hit.
    PF14604. SH3_9. 1 hit.
    [Graphical view]
    SMARTiSM00326. SH3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50044. SSF50044. 1 hit.
    SSF53254. SSF53254. 2 hits.
    PROSITEiPS50002. SH3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZY64-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRFVHYQTLK ALFQYKPQNA DELMLSPGDY IFVDPTQQEE ASEGWAIGIS    50
    HRTGCRGFLP ENYTERANEA DTWVKHRTYT FSLAMDLNSR KEFEASSRRN 100
    GDSHTPSVSR SISDIQALQA TIARRGVLVI RHGERVDQVF GKSWLHQCTT 150
    TDGKYYRPDL NFPRSLPRRS NGIKDFENDP PLSSCGIFQA RLAGEALLDS 200
    GVRVTAVFAS PALRCVQTAK HILEELKLER RLKIKVEPGI FEWMKWEAGK 250
    ATLTFLTLEE LKEADFNVDL DYRPAFPCCS LLPAESYDQY VERCAVSMGQ 300
    IINTCPQDMG ITLIVSHSSA LDSCTRPLLG LPPRECGDFA QLVRKIPSLG 350
    MCFCEENKED GKWDLVNPPV KTLTHGANSV FNWRNWISSN 390
    Length:390
    Mass (Da):44,135
    Last modified:April 3, 2013 - v2
    Checksum:i0A8B254299DF1F9E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06100122 Genomic DNA. No translation available.
    CH473988 Genomic DNA. Translation: EDL97007.1.
    RefSeqiNP_001101090.1. NM_001107620.1.
    UniGeneiRn.85920.

    Genome annotation databases

    EnsembliENSRNOT00000001541; ENSRNOP00000001541; ENSRNOG00000001167.
    GeneIDi309666.
    KEGGirno:309666.
    UCSCiRGD:1310305. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06100122 Genomic DNA. No translation available.
    CH473988 Genomic DNA. Translation: EDL97007.1 .
    RefSeqi NP_001101090.1. NM_001107620.1.
    UniGenei Rn.85920.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000001541 ; ENSRNOP00000001541 ; ENSRNOG00000001167 .
    GeneIDi 309666.
    KEGGi rno:309666.
    UCSCi RGD:1310305. rat.

    Organism-specific databases

    CTDi 53347.
    RGDi 1310305. Ubash3a.

    Phylogenomic databases

    GeneTreei ENSGT00390000018249.
    OMAi HGERCDF.
    OrthoDBi EOG7P5T0D.
    TreeFami TF313334.

    Miscellaneous databases

    NextBioi 35571057.
    PROi D3ZY64.

    Family and domain databases

    Gene3Di 3.40.50.1240. 2 hits.
    InterProi IPR013078. His_Pase_superF_clade-1.
    IPR029033. His_PPase_superfam.
    IPR001452. SH3_domain.
    [Graphical view ]
    Pfami PF00300. His_Phos_1. 1 hit.
    PF14604. SH3_9. 1 hit.
    [Graphical view ]
    SMARTi SM00326. SH3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50044. SSF50044. 1 hit.
    SSF53254. SSF53254. 2 hits.
    PROSITEi PS50002. SH3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZY64_RAT
    AccessioniPrimary (citable) accession number: D3ZY64
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 31 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3