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D3ZXT3 (D3ZXT3_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length849 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSRNOP00000044230

Sequences

Sequence LengthMass (Da)Tools
D3ZXT3 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: F80DC28D39DB1EEC

FASTA84996,772
        10         20         30         40         50         60 
MKKLCAFTVS FLFLKFSLIL CSFTELSCFW RMKNSEDSDG DLRSDCGFVL LTTKKNIEDF 

        70         80         90        100        110        120 
YNDINEVRIP ARRYEFFLVM FFATDEINNN PYLLPNISLI FSIIAGLCED TLGVLDEIYS 

       130        140        150        160        170        180 
QQNNSWNIVN YICEKGQRCD IELTGPSWKA SVKLSIHSMI PSVRMCDTGC VFFGPFNPNL 

       190        200        210        220        230        240 
SDHDQFPYMY QIATKDTCLS HGMVSLILHF RWNWLGLVIS DDDQGIQFLS DLREEMQSHG 

       250        260        270        280        290        300 
ICLAFVNMIP ETMQVYMIKA KIYDKQIMTS SAKVVIIYGE MNSTLEVSFR RWSYLGVQRI 

       310        320        330        340        350        360 
WITTSQWDVI TIKKDFNLDF FHGTLTFAHH KVEVAKFRNF MQTRNPAKYP VKFFESVLGW 

       370        380        390        400        410        420 
NYFNCSISKN SNLMDHFIFN NTLEWIALNK YDMVLSEEGY NLYNAVYAVA HTYHELILQQ 

       430        440        450        460        470        480 
TESQNIAEPN GVFIDCQQVA SLLKTRVFTN PVGELVNMKH REKQCVEYDI FITWNFPEGL 

       490        500        510        520        530        540 
GLKVKIGSYF PCFPQSQQLH ISEDLEWATG GTSVPSSMCS ATCTAGFRKI HQKQTADCCF 

       550        560        570        580        590        600 
DCVQCPENEV SNETADMEQC VRCPDDMYAN LEQTQCLQRT VSFLAYDDPL GIALGCMALS 

       610        620        630        640        650        660 
FSAITILVLV TFVKYKDTPI VKANNRILSY ILLISLVFCF LCSLLFIGHP NQATCILQQT 

       670        680        690        700        710        720 
TFGVFFTVAI STVLAKTITV VMAFKLTTPG RRLRGMMITW ASNFVIPFCT LIQLVLCGIW 

       730        740        750        760        770        780 
LVTSPPFIDR DIQSEHGKTI IICNKGSVIA FHVVLGYLGS LALGSFTIAF LARNLPDRFN 

       790        800        810        820        830        840 
EAKFLTFSML VFYSVWITFL PVYHSTRGKV MVVVEVFSIL ASSADLLGCI FVQKCYIILV 


SSNSNFLHK 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
Rat Genome Sequencing Project Consortium
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. expand/collapse author list , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Brown Norway Ensembl ENSRNOP00000044230.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Brown Norway Ensembl ENSRNOP00000044230.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AABR06077163 Genomic DNA. No translation available.
RefSeqNP_001092938.1. NM_001099468.1.
UniGeneRn.217643.

3D structure databases

ProteinModelPortalD3ZXT3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000039900; ENSRNOP00000044230; ENSRNOG00000040210.
GeneID289433.
KEGGrno:289433.
UCSCRGD:1564750. rat.

Organism-specific databases

CTD289433.
RGD1564750. Vom2r69.

Phylogenomic databases

GeneTreeENSGT00610000086186.
KOK04613.
OMADINEVRI.
OrthoDBEOG7ZPNJF.
PhylomeDBD3ZXT3.
TreeFamTF340115.

Family and domain databases

InterProIPR001828. ANF_lig-bd_rcpt.
IPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR004073. GPCR_3_vmron_rcpt_2.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSPR00248. GPCRMGR.
PR01535. VOMERONASL2R.
SUPFAMSSF53822. SSF53822. 1 hit.
PROSITEPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio629812.

Entry information

Entry nameD3ZXT3_RAT
AccessionPrimary (citable) accession number: D3ZXT3
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)