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Protein
Submitted name:

Protein Vom2r69

Gene

Vom2r69

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

ReceptorSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Vom2r69Imported
Gene namesi
Name:Vom2r69Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494 Componenti: Chromosome 14

Organism-specific databases

RGDi1564750. Vom2r69.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliD3ZXT3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00610000086186.
InParanoidiD3ZXT3.
KOiK04613.
OMAiCDIELTG.
OrthoDBiEOG7ZPNJF.
PhylomeDBiD3ZXT3.
TreeFamiTF340115.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR004073. GPCR_3_vmron_rcpt_2.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSiPR00248. GPCRMGR.
PR01535. VOMERONASL2R.
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZXT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKLCAFTVS FLFLKFSLIL CSFTELSCFW RMKNSEDSDG DLRSDCGFVL
60 70 80 90 100
LTTKKNIEDF YNDINEVRIP ARRYEFFLVM FFATDEINNN PYLLPNISLI
110 120 130 140 150
FSIIAGLCED TLGVLDEIYS QQNNSWNIVN YICEKGQRCD IELTGPSWKA
160 170 180 190 200
SVKLSIHSMI PSVRMCDTGC VFFGPFNPNL SDHDQFPYMY QIATKDTCLS
210 220 230 240 250
HGMVSLILHF RWNWLGLVIS DDDQGIQFLS DLREEMQSHG ICLAFVNMIP
260 270 280 290 300
ETMQVYMIKA KIYDKQIMTS SAKVVIIYGE MNSTLEVSFR RWSYLGVQRI
310 320 330 340 350
WITTSQWDVI TIKKDFNLDF FHGTLTFAHH KVEVAKFRNF MQTRNPAKYP
360 370 380 390 400
VKFFESVLGW NYFNCSISKN SNLMDHFIFN NTLEWIALNK YDMVLSEEGY
410 420 430 440 450
NLYNAVYAVA HTYHELILQQ TESQNIAEPN GVFIDCQQVA SLLKTRVFTN
460 470 480 490 500
PVGELVNMKH REKQCVEYDI FITWNFPEGL GLKVKIGSYF PCFPQSQQLH
510 520 530 540 550
ISEDLEWATG GTSVPSSMCS ATCTAGFRKI HQKQTADCCF DCVQCPENEV
560 570 580 590 600
SNETADMEQC VRCPDDMYAN LEQTQCLQRT VSFLAYDDPL GIALGCMALS
610 620 630 640 650
FSAITILVLV TFVKYKDTPI VKANNRILSY ILLISLVFCF LCSLLFIGHP
660 670 680 690 700
NQATCILQQT TFGVFFTVAI STVLAKTITV VMAFKLTTPG RRLRGMMITW
710 720 730 740 750
ASNFVIPFCT LIQLVLCGIW LVTSPPFIDR DIQSEHGKTI IICNKGSVIA
760 770 780 790 800
FHVVLGYLGS LALGSFTIAF LARNLPDRFN EAKFLTFSML VFYSVWITFL
810 820 830 840
PVYHSTRGKV MVVVEVFSIL ASSADLLGCI FVQKCYIILV SSNSNFLHK
Length:849
Mass (Da):96,772
Last modified:April 19, 2010 - v1
Checksum:iF80DC28D39DB1EEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06077163 Genomic DNA. No translation available.
RefSeqiNP_001092938.1. NM_001099468.1.
UniGeneiRn.217643.

Genome annotation databases

EnsembliENSRNOT00000039900; ENSRNOP00000044230; ENSRNOG00000040210.
GeneIDi289433.
KEGGirno:289433.
UCSCiRGD:1564750. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06077163 Genomic DNA. No translation available.
RefSeqiNP_001092938.1. NM_001099468.1.
UniGeneiRn.217643.

3D structure databases

ProteinModelPortaliD3ZXT3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000039900; ENSRNOP00000044230; ENSRNOG00000040210.
GeneIDi289433.
KEGGirno:289433.
UCSCiRGD:1564750. rat.

Organism-specific databases

CTDi289433.
RGDi1564750. Vom2r69.

Phylogenomic databases

GeneTreeiENSGT00610000086186.
InParanoidiD3ZXT3.
KOiK04613.
OMAiCDIELTG.
OrthoDBiEOG7ZPNJF.
PhylomeDBiD3ZXT3.
TreeFamiTF340115.

Miscellaneous databases

NextBioi629812.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR004073. GPCR_3_vmron_rcpt_2.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSiPR00248. GPCRMGR.
PR01535. VOMERONASL2R.
SUPFAMiSSF53822. SSF53822. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZXT3_RAT
AccessioniPrimary (citable) accession number: D3ZXT3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 19, 2010
Last sequence update: April 19, 2010
Last modified: March 31, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.