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D3ZX78

- D3ZX78_RAT

UniProt

D3ZX78 - D3ZX78_RAT

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Protein
Submitted name: Protein Vom2r16
Gene
Vom2r16
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    G-protein coupled receptorSAAS annotations, Receptor, Transducer

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Vom2r16Imported
    Gene namesi
    Name:Vom2r16Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 1

    Organism-specific databases

    RGDi1593384. Vom2r16.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-KW
    Complete GO annotation...

    Keywords - Cellular componenti

    Cell membraneSAAS annotations, Membrane

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotations

    Phylogenomic databases

    GeneTreeiENSGT00740000115606.
    OMAiCEISASN.
    TreeFamiTF340115.

    Family and domain databases

    InterProiIPR001828. ANF_lig-bd_rcpt.
    IPR000337. GPCR_3.
    IPR011500. GPCR_3_9-Cys_dom.
    IPR017978. GPCR_3_C.
    IPR004073. GPCR_3_vmron_rcpt_2.
    IPR028082. Peripla_BP_I.
    [Graphical view]
    PfamiPF00003. 7tm_3. 1 hit.
    PF01094. ANF_receptor. 1 hit.
    PF07562. NCD3G. 1 hit.
    [Graphical view]
    PRINTSiPR00248. GPCRMGR.
    PR01535. VOMERONASL2R.
    SUPFAMiSSF53822. SSF53822. 1 hit.
    PROSITEiPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZX78-1 [UniParc]FASTAAdd to Basket

    « Hide

    MHTLILFFLL LNIPLLVVSL IHPRCFWRMK QNEEKNGNLK TGCIFAFGVV    50
    KWPVEKEYYY NILSTQTNTE NHQFSLALAF SMDEINKNPD LLPNKSLLFD 100
    FPFYSCKSHS ELTTLIHGSV QQYDIFPNYV CNNETMCTLL LTGPNWKISV 150
    ILRTYLDLYK SQQFLQLTYG PFHPVLSDNE QFPYLYQMAP KETSLALALV 200
    SFLIHFSWNW IGLAISDNDQ GNQFLSYLRT EMGKYTVCFA FVNMIPVNMQ 250
    LFMTRTDVYY NQIITSSTNV VIVYGDTDST LALGFKMWKS LGVQRIWVTT 300
    SEWDVITSKR DFTFDTFHSI IAFQHHHGEI SGFKNFVQTL NPFKYSDKYL 350
    VKLEWMYFNC EISASNCKTL KNCLYNESFE WLSEQTFDMA FSDGTHDIYN 400
    AAYAVAHALH EFFLQQGDNQ QKYRGKWPNS VCLKLHSLLK KTHFTNPVGD 450
    RVIMNQREKM QEEYDIFYIW NFPQGLGLKV KIGEFSPYYS SGKQLWLFED 500
    MIEWTTGNRQ MPSSVCNSDC GPGFRKIWKE GMSTCCFDCI HCQENEISNE 550
    TNVDQCVKCP EDQYANPEQN HCIHKALIFL TYQETLGMTL SLVALCLSTL 600
    TAAILGVFVK YHTTPIVKAN NCRLTYILLI TLIFCFLCPL LYIGHPNSVT 650
    CVLQQVTFGI VFTVAISTVL AKTITVILAF KVTAPQRMIK YFLISGVFNY 700
    IIPICTLIQV FVCTLWLGTS PPSVDFDPQS EHGHIIIVCN KGSVTAFYCM 750
    LGYLSCLALG SFTLAFLSRN LPGTFNEAKF LTFSMLVFCS VWITFLPVYH 800
    STKGKVMVAV EIFSTLASSA GMLGCIFIPK CYIILLRPER NSLQX 845
    Length:845
    Mass (Da):96,903
    Last modified:April 3, 2013 - v2
    Checksum:iFEA78FED67436B79
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06003003 Genomic DNA. No translation available.
    AABR06003004 Genomic DNA. No translation available.
    AABR06003005 Genomic DNA. No translation available.
    AABR06003006 Genomic DNA. No translation available.
    AABR06003007 Genomic DNA. No translation available.
    AABR06003008 Genomic DNA. No translation available.
    AABR06003009 Genomic DNA. No translation available.
    AABR06003010 Genomic DNA. No translation available.
    AABR06003011 Genomic DNA. No translation available.
    AABR06003012 Genomic DNA. No translation available.
    AABR06003013 Genomic DNA. No translation available.
    AABR06003014 Genomic DNA. No translation available.
    AABR06003015 Genomic DNA. No translation available.
    AABR06003016 Genomic DNA. No translation available.
    AABR06003017 Genomic DNA. No translation available.
    AABR06003018 Genomic DNA. No translation available.
    AABR06003019 Genomic DNA. No translation available.
    AABR06003020 Genomic DNA. No translation available.
    AABR06003021 Genomic DNA. No translation available.
    AABR06003022 Genomic DNA. No translation available.
    AABR06003023 Genomic DNA. No translation available.
    AABR06003024 Genomic DNA. No translation available.
    AABR06003025 Genomic DNA. No translation available.
    AABR06003026 Genomic DNA. No translation available.
    AABR06003027 Genomic DNA. No translation available.
    AABR06003028 Genomic DNA. No translation available.
    AABR06003029 Genomic DNA. No translation available.
    AABR06003030 Genomic DNA. No translation available.
    AABR06003031 Genomic DNA. No translation available.
    AABR06003032 Genomic DNA. No translation available.
    AABR06003033 Genomic DNA. No translation available.
    AABR06003034 Genomic DNA. No translation available.
    AABR06003035 Genomic DNA. No translation available.
    AABR06003036 Genomic DNA. No translation available.
    AABR06003037 Genomic DNA. No translation available.
    AABR06003038 Genomic DNA. No translation available.
    AABR06003039 Genomic DNA. No translation available.
    AABR06003040 Genomic DNA. No translation available.
    AABR06003041 Genomic DNA. No translation available.
    AABR06003042 Genomic DNA. No translation available.
    AABR06003043 Genomic DNA. No translation available.
    AABR06003044 Genomic DNA. No translation available.
    AABR06003045 Genomic DNA. No translation available.
    AABR06003046 Genomic DNA. No translation available.
    AABR06003047 Genomic DNA. No translation available.
    AABR06003048 Genomic DNA. No translation available.
    AABR06003049 Genomic DNA. No translation available.
    AABR06003050 Genomic DNA. No translation available.
    AABR06003051 Genomic DNA. No translation available.
    AABR06003052 Genomic DNA. No translation available.
    AABR06003053 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000059506; ENSRNOP00000056264; ENSRNOG00000049871.
    UCSCiRGD:1593384. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06003003 Genomic DNA. No translation available.
    AABR06003004 Genomic DNA. No translation available.
    AABR06003005 Genomic DNA. No translation available.
    AABR06003006 Genomic DNA. No translation available.
    AABR06003007 Genomic DNA. No translation available.
    AABR06003008 Genomic DNA. No translation available.
    AABR06003009 Genomic DNA. No translation available.
    AABR06003010 Genomic DNA. No translation available.
    AABR06003011 Genomic DNA. No translation available.
    AABR06003012 Genomic DNA. No translation available.
    AABR06003013 Genomic DNA. No translation available.
    AABR06003014 Genomic DNA. No translation available.
    AABR06003015 Genomic DNA. No translation available.
    AABR06003016 Genomic DNA. No translation available.
    AABR06003017 Genomic DNA. No translation available.
    AABR06003018 Genomic DNA. No translation available.
    AABR06003019 Genomic DNA. No translation available.
    AABR06003020 Genomic DNA. No translation available.
    AABR06003021 Genomic DNA. No translation available.
    AABR06003022 Genomic DNA. No translation available.
    AABR06003023 Genomic DNA. No translation available.
    AABR06003024 Genomic DNA. No translation available.
    AABR06003025 Genomic DNA. No translation available.
    AABR06003026 Genomic DNA. No translation available.
    AABR06003027 Genomic DNA. No translation available.
    AABR06003028 Genomic DNA. No translation available.
    AABR06003029 Genomic DNA. No translation available.
    AABR06003030 Genomic DNA. No translation available.
    AABR06003031 Genomic DNA. No translation available.
    AABR06003032 Genomic DNA. No translation available.
    AABR06003033 Genomic DNA. No translation available.
    AABR06003034 Genomic DNA. No translation available.
    AABR06003035 Genomic DNA. No translation available.
    AABR06003036 Genomic DNA. No translation available.
    AABR06003037 Genomic DNA. No translation available.
    AABR06003038 Genomic DNA. No translation available.
    AABR06003039 Genomic DNA. No translation available.
    AABR06003040 Genomic DNA. No translation available.
    AABR06003041 Genomic DNA. No translation available.
    AABR06003042 Genomic DNA. No translation available.
    AABR06003043 Genomic DNA. No translation available.
    AABR06003044 Genomic DNA. No translation available.
    AABR06003045 Genomic DNA. No translation available.
    AABR06003046 Genomic DNA. No translation available.
    AABR06003047 Genomic DNA. No translation available.
    AABR06003048 Genomic DNA. No translation available.
    AABR06003049 Genomic DNA. No translation available.
    AABR06003050 Genomic DNA. No translation available.
    AABR06003051 Genomic DNA. No translation available.
    AABR06003052 Genomic DNA. No translation available.
    AABR06003053 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000059506 ; ENSRNOP00000056264 ; ENSRNOG00000049871 .
    UCSCi RGD:1593384. rat.

    Organism-specific databases

    RGDi 1593384. Vom2r16.

    Phylogenomic databases

    GeneTreei ENSGT00740000115606.
    OMAi CEISASN.
    TreeFami TF340115.

    Miscellaneous databases

    NextBioi 35570826.

    Family and domain databases

    InterProi IPR001828. ANF_lig-bd_rcpt.
    IPR000337. GPCR_3.
    IPR011500. GPCR_3_9-Cys_dom.
    IPR017978. GPCR_3_C.
    IPR004073. GPCR_3_vmron_rcpt_2.
    IPR028082. Peripla_BP_I.
    [Graphical view ]
    Pfami PF00003. 7tm_3. 1 hit.
    PF01094. ANF_receptor. 1 hit.
    PF07562. NCD3G. 1 hit.
    [Graphical view ]
    PRINTSi PR00248. GPCRMGR.
    PR01535. VOMERONASL2R.
    SUPFAMi SSF53822. SSF53822. 1 hit.
    PROSITEi PS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZX78_RAT
    AccessioniPrimary (citable) accession number: D3ZX78
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: May 14, 2014
    This is version 35 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteome

    External Data

    Dasty 3

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