D3ZX78 (D3ZX78_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Vom2r16 Ensembl ENSRNOP00000056264

Gene names

Name:

Vom2r16 Ensembl ENSRNOP00000056264 RGD 1593384

Organism

Rattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000056264

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	845 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein By similarity SAAS SAAS011500.
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSRNOP00000056264

Ontologies

Keywords
Cellular component	Cell membrane SAAS SAAS011500 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS011500
Molecular function	G-protein coupled receptor SAAS SAAS011500 Receptor Transducer
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	G-protein coupled receptor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3ZX78 [UniParc]. Last modified April 3, 2013. Version 2. Checksum: FEA78FED67436B79	FASTA	845	96,903
	10 20 30 40 50 60 MHTLILFFLL LNIPLLVVSL IHPRCFWRMK QNEEKNGNLK TGCIFAFGVV KWPVEKEYYY 70 80 90 100 110 120 NILSTQTNTE NHQFSLALAF SMDEINKNPD LLPNKSLLFD FPFYSCKSHS ELTTLIHGSV 130 140 150 160 170 180 QQYDIFPNYV CNNETMCTLL LTGPNWKISV ILRTYLDLYK SQQFLQLTYG PFHPVLSDNE 190 200 210 220 230 240 QFPYLYQMAP KETSLALALV SFLIHFSWNW IGLAISDNDQ GNQFLSYLRT EMGKYTVCFA 250 260 270 280 290 300 FVNMIPVNMQ LFMTRTDVYY NQIITSSTNV VIVYGDTDST LALGFKMWKS LGVQRIWVTT 310 320 330 340 350 360 SEWDVITSKR DFTFDTFHSI IAFQHHHGEI SGFKNFVQTL NPFKYSDKYL VKLEWMYFNC 370 380 390 400 410 420 EISASNCKTL KNCLYNESFE WLSEQTFDMA FSDGTHDIYN AAYAVAHALH EFFLQQGDNQ 430 440 450 460 470 480 QKYRGKWPNS VCLKLHSLLK KTHFTNPVGD RVIMNQREKM QEEYDIFYIW NFPQGLGLKV 490 500 510 520 530 540 KIGEFSPYYS SGKQLWLFED MIEWTTGNRQ MPSSVCNSDC GPGFRKIWKE GMSTCCFDCI 550 560 570 580 590 600 HCQENEISNE TNVDQCVKCP EDQYANPEQN HCIHKALIFL TYQETLGMTL SLVALCLSTL 610 620 630 640 650 660 TAAILGVFVK YHTTPIVKAN NCRLTYILLI TLIFCFLCPL LYIGHPNSVT CVLQQVTFGI 670 680 690 700 710 720 VFTVAISTVL AKTITVILAF KVTAPQRMIK YFLISGVFNY IIPICTLIQV FVCTLWLGTS 730 740 750 760 770 780 PPSVDFDPQS EHGHIIIVCN KGSVTAFYCM LGYLSCLALG SFTLAFLSRN LPGTFNEAKF 790 800 810 820 830 840 LTFSMLVFCS VWITFLPVYH STKGKVMVAV EIFSTLASSA GMLGCIFIPK CYIILLRPER NSLQX

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000056264.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000056264.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR06003003 Genomic DNA. No translation available. AABR06003004 Genomic DNA. No translation available. AABR06003005 Genomic DNA. No translation available. AABR06003006 Genomic DNA. No translation available. AABR06003007 Genomic DNA. No translation available. AABR06003008 Genomic DNA. No translation available. AABR06003009 Genomic DNA. No translation available. AABR06003010 Genomic DNA. No translation available. AABR06003011 Genomic DNA. No translation available. AABR06003012 Genomic DNA. No translation available. AABR06003013 Genomic DNA. No translation available. AABR06003014 Genomic DNA. No translation available. AABR06003015 Genomic DNA. No translation available. AABR06003016 Genomic DNA. No translation available. AABR06003017 Genomic DNA. No translation available. AABR06003018 Genomic DNA. No translation available. AABR06003019 Genomic DNA. No translation available. AABR06003020 Genomic DNA. No translation available. AABR06003021 Genomic DNA. No translation available. AABR06003022 Genomic DNA. No translation available. AABR06003023 Genomic DNA. No translation available. AABR06003024 Genomic DNA. No translation available. AABR06003025 Genomic DNA. No translation available. AABR06003026 Genomic DNA. No translation available. AABR06003027 Genomic DNA. No translation available. AABR06003028 Genomic DNA. No translation available. AABR06003029 Genomic DNA. No translation available. AABR06003030 Genomic DNA. No translation available. AABR06003031 Genomic DNA. No translation available. AABR06003032 Genomic DNA. No translation available. AABR06003033 Genomic DNA. No translation available. AABR06003034 Genomic DNA. No translation available. AABR06003035 Genomic DNA. No translation available. AABR06003036 Genomic DNA. No translation available. AABR06003037 Genomic DNA. No translation available. AABR06003038 Genomic DNA. No translation available. AABR06003039 Genomic DNA. No translation available. AABR06003040 Genomic DNA. No translation available. AABR06003041 Genomic DNA. No translation available. AABR06003042 Genomic DNA. No translation available. AABR06003043 Genomic DNA. No translation available. AABR06003044 Genomic DNA. No translation available. AABR06003045 Genomic DNA. No translation available. AABR06003046 Genomic DNA. No translation available. AABR06003047 Genomic DNA. No translation available. AABR06003048 Genomic DNA. No translation available. AABR06003049 Genomic DNA. No translation available. AABR06003050 Genomic DNA. No translation available. AABR06003051 Genomic DNA. No translation available. AABR06003052 Genomic DNA. No translation available. AABR06003053 Genomic DNA. No translation available.
IPI	IPI00779024.
3D structure databases
ProteinModelPortal	D3ZX78.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000059506; ENSRNOP00000056264; ENSRNOG00000049871.
KEGG	rno:690691.
UCSC	RGD:1593384. rat.
Organism-specific databases
CTD	690691.
RGD	1593384. Vom2r16.
Phylogenomic databases
GeneTree	ENSGT00700000104232.
Family and domain databases
InterPro	IPR001828. ANF_lig-bd_rcpt. IPR000337. GPCR_3. IPR011500. GPCR_3_9-Cys_dom. IPR017978. GPCR_3_C. IPR004073. GPCR_3_vmron_rcpt_2. [Graphical view]
Pfam	PF00003. 7tm_3. 1 hit. PF01094. ANF_receptor. 1 hit. PF07562. NCD3G. 1 hit. [Graphical view]
PRINTS	PR00248. GPCRMGR. PR01535. VOMERONASL2R.
PROSITE	PS50259. G_PROTEIN_RECEP_F3_4. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35570826.

Entry information

Entry name

D3ZX78_RAT

Accession

Primary (citable) accession number: D3ZX78

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 3, 2013
Last modified:	May 1, 2013
This is version 26 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)