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D3ZWA8

- D3ZWA8_RAT

UniProt

D3ZWA8 - D3ZWA8_RAT

Protein
Submitted name:

Protein Appl1

Gene

Appl1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: RGD

    GO - Biological processi

    1. cell proliferation Source: Ensembl
    2. regulation of establishment of protein localization to plasma membrane Source: Ensembl
    3. regulation of glucose import Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Appl1Imported
    Gene namesi
    Name:Appl1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 16

    Organism-specific databases

    RGDi1309388. Appl1.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: Ensembl
    2. endosome membrane Source: Ensembl
    3. NuRD complex Source: Ensembl
    4. vesicle membrane Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PRIDEiD3ZWA8.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00710000106752.
    OMAiSDVETMQ.
    OrthoDBiEOG79PJPK.
    TreeFamiTF328669.

    Family and domain databases

    Gene3Di1.20.1270.60. 1 hit.
    2.30.29.30. 2 hits.
    InterProiIPR027267. AH/BAR-dom.
    IPR001849. PH_domain.
    IPR011993. PH_like_dom.
    IPR006020. PTB/PI_dom.
    [Graphical view]
    PfamiPF00640. PID. 1 hit.
    [Graphical view]
    SMARTiSM00233. PH. 1 hit.
    [Graphical view]
    PROSITEiPS50003. PH_DOMAIN. 1 hit.
    PS01179. PID. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    D3ZWA8-1 [UniParc]FASTAAdd to Basket

    « Hide

    QTRSLLGVFE EDATAISNYM NQLYQAMHRI YDAQNELSAA THLTSKLLKE    50
    YEKQRFPLGG DDEVMSSTLQ QFSKVIDELS SCHAVLSTQL ADAMMFPISQ 100
    FKERDLKEIL TLKEVFQIAS NDHDAAINRY SRLSKKREND KVKYEVTEDV 150
    YTSRKKQHQT MMHYFCALNT LQYKKKIALL EPLLGYMQAQ ISFFKMGSEN 200
    LNGQLEEFLA NIGTSVQNVR REMDGDVETM QQTIEDLEVA SDPLYLPDPD 250
    PTKFPVNRNL TRKAGYLNAR NKTGLVSSTW DRQFYFTQGG NLMSQARGDV 300
    AGGLAMDIDN CSVMAVDCED RRYCFQITSF DGKKSSILQA ESKKDHEEWI 350
    CTINNISKQI YLSENPEETA ARVNQSALEA VTPSPSFQQR HESLRPGGQS 400
    RPPTARTSSS GSLGSESTNL AALSLDSLVA PDTPIQFDII SPVCEDQPGQ 450
    AKAFGQGGRR TNPFGESGGS TKSETEDSIL HQLFIVRFLG SMEVKSDDHP 500
    DVVYETMRQI LAARAIHNIF RMTESHLLVT CDCLKLIDPQ TQVTRLTFPL 550
    PYVVLYATHQ ENKRLFGFVL RTSGGRSESN LSSVCYIFES NNEGEKICDS 600
    VGLAKQIALH AELDRRASEK QKEIERVKEK QQKELSKQKE IEKDLEEQSR 650
    LIAASSRPSQ SGSEGQLVLS SSQSEESDLG EEGKKRESEA 690
    Length:690
    Mass (Da):77,498
    Last modified:April 3, 2013 - v2
    Checksum:i7DDC1A474B099BE6
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06086214 Genomic DNA. No translation available.
    AABR06086215 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000018413; ENSRNOP00000018413; ENSRNOG00000013574.
    UCSCiRGD:1309388. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06086214 Genomic DNA. No translation available.
    AABR06086215 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi D3ZWA8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000018413 ; ENSRNOP00000018413 ; ENSRNOG00000013574 .
    UCSCi RGD:1309388. rat.

    Organism-specific databases

    RGDi 1309388. Appl1.

    Phylogenomic databases

    GeneTreei ENSGT00710000106752.
    OMAi SDVETMQ.
    OrthoDBi EOG79PJPK.
    TreeFami TF328669.

    Miscellaneous databases

    NextBioi 34025762.
    PROi D3ZWA8.

    Family and domain databases

    Gene3Di 1.20.1270.60. 1 hit.
    2.30.29.30. 2 hits.
    InterProi IPR027267. AH/BAR-dom.
    IPR001849. PH_domain.
    IPR011993. PH_like_dom.
    IPR006020. PTB/PI_dom.
    [Graphical view ]
    Pfami PF00640. PID. 1 hit.
    [Graphical view ]
    SMARTi SM00233. PH. 1 hit.
    [Graphical view ]
    PROSITEi PS50003. PH_DOMAIN. 1 hit.
    PS01179. PID. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZWA8_RAT
    AccessioniPrimary (citable) accession number: D3ZWA8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 42 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3