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D3ZVM9

- D3ZVM9_RAT

UniProt

D3ZVM9 - D3ZVM9_RAT

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Protein
Submitted name:

Chemokine (C-C motif) receptor-like 2 (Predicted)

Gene

Ccrl2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. chemokine receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
  2. inflammatory response Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorSAAS annotation, Receptor, Transducer

Enzyme and pathway databases

ReactomeiREACT_263785. Chemokine receptors bind chemokines.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemokine (C-C motif) receptor-like 2 (Predicted)Imported
Submitted name:
Protein Ccrl2Imported
Gene namesi
Name:Ccrl2Imported
Synonyms:Ccrl2_predictedImported
ORF Names:rCG_25931Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 8

Organism-specific databases

RGDi1311811. Ccrl2.

Subcellular locationi

GO - Cellular componenti

  1. integral component of plasma membrane Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118785.
KOiK08373.
OMAiFLLMWAP.
OrthoDBiEOG77HDFH.
TreeFamiTF330966.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PANTHERiPTHR24227. PTHR24227. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00657. CCCHEMOKINER.
PR00237. GPCRRHODOPSN.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZVM9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIDHWAAPFP TLGNPVKWLS LSRQLVRVLD QRSFTFANIC LYPPREKYQA
60 70 80 90 100
ACLDHAVLGS EQGQPPMDNY TVAPEDEYDV LIEDDLDNSG TDQVPTPEFL
110 120 130 140 150
SAQQALHFCC TVFAVGLLDN TLAVFILAKY RGLRNPGNIY FLNLALSNLC
160 170 180 190 200
FLLPLPFWAH TAAHGESPGN ETCKVLVGLH SMGLYSETLC NILLLVQGYR
210 220 230 240 250
VFSQGRLSSI FTTVSGGIVT CVLAWAVAAA LSLPEAVFYE PRMERQKHKC
260 270 280 290 300
GFGKPHFLTI EAPIWKYVLT SKMNILVLVF PLLVFIFCCR QMRTAQNFRE
310 320 330 340 350
RQCDLRKAAL VITGVFLLMW APYNVVLFLS ALQEHLSLQD DKSSYYLDAS
360 370 380 390 400
TQVTQLIATT HCCVNPLLYL LLDKAFRSYL CSLFPRCNDL PFQSGRDSQQ
410 420
ETPREGHSRP IELYGTLPQR QDI
Length:423
Mass (Da):47,674
Last modified:April 20, 2010 - v1
Checksum:i3F817BCBDB676EFC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06057143 Genomic DNA. No translation available.
CH473954 Genomic DNA. Translation: EDL77039.1.
RefSeqiNP_001101661.1. NM_001108191.1.
UniGeneiRn.67232.

Genome annotation databases

EnsembliENSRNOT00000044467; ENSRNOP00000044084; ENSRNOG00000033234.
GeneIDi316019.
KEGGirno:316019.
UCSCiRGD:1311811. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06057143 Genomic DNA. No translation available.
CH473954 Genomic DNA. Translation: EDL77039.1 .
RefSeqi NP_001101661.1. NM_001108191.1.
UniGenei Rn.67232.

3D structure databases

ModBasei Search...
MobiDBi Search...

Chemistry

GuidetoPHARMACOLOGYi 78.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000044467 ; ENSRNOP00000044084 ; ENSRNOG00000033234 .
GeneIDi 316019.
KEGGi rno:316019.
UCSCi RGD:1311811. rat.

Organism-specific databases

CTDi 9034.
RGDi 1311811. Ccrl2.

Phylogenomic databases

GeneTreei ENSGT00760000118785.
KOi K08373.
OMAi FLLMWAP.
OrthoDBi EOG77HDFH.
TreeFami TF330966.

Enzyme and pathway databases

Reactomei REACT_263785. Chemokine receptors bind chemokines.

Miscellaneous databases

NextBioi 670303.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view ]
PANTHERi PTHR24227. PTHR24227. 1 hit.
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00657. CCCHEMOKINER.
PR00237. GPCRRHODOPSN.
PROSITEi PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZVM9_RAT
AccessioniPrimary (citable) accession number: D3ZVM9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 26, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3