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Protein
Submitted name:

ERGIC and golgi 3

Gene

Ergic3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
ERGIC and golgi 3Imported
Submitted name:
ERGIC and golgi 3 (Predicted)Imported
Gene namesi
Name:Ergic3Imported
Synonyms:Ergic3_predictedImported
ORF Names:rCG_37412Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1308144. Ergic3.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 43HelicalSequence analysisAdd BLAST24
Transmembranei341 – 362HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSRNOG00000031085.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000044589.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini145 – 363COPIIcoated_ERVInterPro annotationAdd BLAST219

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2667. Eukaryota.
ENOG410XP7X. LUCA.
GeneTreeiENSGT00530000063113.
KOiK20367.
OMAiVHVHAVE.
OrthoDBiEOG091G08NM.

Family and domain databases

InterProiView protein in InterPro
IPR012936. Erv_C.
PfamiView protein in Pfam
PF07970. COPIIcoated_ERV. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZU83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEALGKLKQF DAYPKTLEDF RVKTCGGATV TIVSGLLMLL LFLSELQYYL
60 70 80 90 100
TTEVHPELYV DKSRGDKLKI NIDVLFPHMP CAYLSIDAMD VAGEQQLDVE
110 120 130 140 150
HNLFKKRLDK DGIPVSSEAE RHELGKVEVT VFDPDSLDPN RCESCYGAES
160 170 180 190 200
EDIKCCNSCE DVREAYRRRG WAFKNPDTIE QCRREGFSQK MQEQKNEGCQ
210 220 230 240 250
VYGFLEVNKV AGNFHFAPGK SFQQSHVHVH DLQSFGLDNI NMTHYIKHLS
260 270 280 290 300
FGEDYPGIVN PLDHTNVTAP QASMMFQYFV KVVPTVYMKV DGEVLRTNQF
310 320 330 340 350
SVTRHEKVAN GLLGDQGLPG VFVLYELSPM MVKLTEKHRS FTHFLTGVCA
360 370 380
IIGGMFTVAG LIDSLIYHSA RAIQKKIDLG KTT
Length:383
Mass (Da):43,223
Last modified:April 20, 2010 - v1
Checksum:i1EDD00EC19E1E690
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC118414 Genomic DNA. No translation available.
CH474050 Genomic DNA. Translation: EDL85880.1.
RefSeqiNP_001100003.1. NM_001106533.1.
UniGeneiRn.22956.

Genome annotation databases

EnsembliENSRNOT00000045484; ENSRNOP00000044589; ENSRNOG00000031085.
GeneIDi296306.
KEGGirno:296306.
UCSCiRGD:1308144. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC118414 Genomic DNA. No translation available.
CH474050 Genomic DNA. Translation: EDL85880.1.
RefSeqiNP_001100003.1. NM_001106533.1.
UniGeneiRn.22956.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000044589.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000045484; ENSRNOP00000044589; ENSRNOG00000031085.
GeneIDi296306.
KEGGirno:296306.
UCSCiRGD:1308144. rat.

Organism-specific databases

CTDi51614.
RGDi1308144. Ergic3.

Phylogenomic databases

eggNOGiKOG2667. Eukaryota.
ENOG410XP7X. LUCA.
GeneTreeiENSGT00530000063113.
KOiK20367.
OMAiVHVHAVE.
OrthoDBiEOG091G08NM.

Gene expression databases

BgeeiENSRNOG00000031085.

Family and domain databases

InterProiView protein in InterPro
IPR012936. Erv_C.
PfamiView protein in Pfam
PF07970. COPIIcoated_ERV. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZU83_RAT
AccessioniPrimary (citable) accession number: D3ZU83
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 7, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.