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D3ZU21

- D3ZU21_RAT

UniProt

D3ZU21 - D3ZU21_RAT

Protein
Submitted name:

Protein Pibf1

Gene

Pibf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Pibf1Imported
    Gene namesi
    Name:Pibf1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 15

    Organism-specific databases

    RGDi1305077. Pibf1.

    Subcellular locationi

    GO - Cellular componenti

    1. centrosome Source: Ensembl

    Structurei

    3D structure databases

    ProteinModelPortaliD3ZU21.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000015293.
    KOiK16538.
    OMAiEYENKLH.
    OrthoDBiEOG7B8S3C.
    PhylomeDBiD3ZU21.
    TreeFamiTF329068.

    Family and domain databases

    InterProiIPR026205. PIBF1.
    [Graphical view]
    PANTHERiPTHR18950. PTHR18950. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D3ZU21-1 [UniParc]FASTAAdd to Basket

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    MSRKIAKESK KVNISSSLES EDISLETTIH TDDVSSSEER EGKVKITRQL    50
    IERKEILHNI QLLKIELSQK NMMIDNLKMD YLTKVEELEE KLNDALHQKQ 100
    LLTLRLDNQL TIQQKDAKKY QELMKQEMET ILLRQKQLEE TNHQLREKAG 150
    DVRRNLRDLE LTEEQYEKLK SFPEDQLSIP EFVSIRFYEL VNPLRKEIHE 200
    LQVKKNELSE ELSTNKGQLK QLTETYEEAR RNHSELLTRC QRLALELADT 250
    KQLVQQGDYR QENYDKVKSE RDALEQEVLE VRRKHEVLET SHIAQAKERN 300
    ELSKEVSTLQ QTVTLLQKDK EYLNRQNMEL SVRCAHEEDR LERLQVQLEE 350
    TKRAREEMYE KYVTSRDHYK TEYENKLHDE LEQIKLKTNL EIDQLRSASR 400
    EMYERENRNL REARDNALAE KNRAVTAEKD ALEKHEQLLD RYRELQLSTE 450
    SKVSEFLHQS KLKSFESERV QLLQEETARN LTQCQLECEK YQKKLEVLTK 500
    EFYSLQASSE KRITELEAQN SEHQARLDIY EKLEKELDEI IMQTAEIENE 550
    DEAERILYSY GYGANVPTTA KRRLKQSVHL ARRVLQLEKQ NSSILKDLDH 600
    QKEEVRQLSQ ELDRANSLLN QSQQPYRYLI ESVRQRDSKI DSLMKCTAQL 650
    EKDVSNLNKE KSALLQTKNQ MALDLEQLLN HREEFAAMKQ IIINMCSKHS 700
    ENNLLLTKVE SKSVTENQAS RPLTMPREHE ENVFIPKPTL FTKKEAQEWP 750
    KNQKMKA 757
    Length:757
    Mass (Da):89,793
    Last modified:April 20, 2010 - v1
    Checksum:i06F1A165903CB7D2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06085099 Genomic DNA. No translation available.
    AABR06085100 Genomic DNA. No translation available.
    AABR06085101 Genomic DNA. No translation available.
    AABR06085102 Genomic DNA. No translation available.
    AABR06085103 Genomic DNA. No translation available.
    AABR06085104 Genomic DNA. No translation available.
    AABR06085105 Genomic DNA. No translation available.
    AABR06085106 Genomic DNA. No translation available.
    AABR06085107 Genomic DNA. No translation available.
    AABR06085108 Genomic DNA. No translation available.
    AABR06085109 Genomic DNA. No translation available.
    AABR06085110 Genomic DNA. No translation available.
    AABR06085111 Genomic DNA. No translation available.
    RefSeqiXP_001073989.1. XM_001073989.4.
    XP_006222106.1. XM_006222044.1.
    XP_006222107.1. XM_006222045.1.
    XP_006222108.1. XM_006222046.1.
    XP_006252466.1. XM_006252404.1.
    XP_006252467.1. XM_006252405.1.
    XP_006252468.1. XM_006252406.1.
    XP_224451.3. XM_224451.7.

    Genome annotation databases

    EnsembliENSRNOT00000036350; ENSRNOP00000037643; ENSRNOG00000009208.
    GeneIDi306104.
    KEGGirno:306104.
    UCSCiRGD:1305077. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06085099 Genomic DNA. No translation available.
    AABR06085100 Genomic DNA. No translation available.
    AABR06085101 Genomic DNA. No translation available.
    AABR06085102 Genomic DNA. No translation available.
    AABR06085103 Genomic DNA. No translation available.
    AABR06085104 Genomic DNA. No translation available.
    AABR06085105 Genomic DNA. No translation available.
    AABR06085106 Genomic DNA. No translation available.
    AABR06085107 Genomic DNA. No translation available.
    AABR06085108 Genomic DNA. No translation available.
    AABR06085109 Genomic DNA. No translation available.
    AABR06085110 Genomic DNA. No translation available.
    AABR06085111 Genomic DNA. No translation available.
    RefSeqi XP_001073989.1. XM_001073989.4.
    XP_006222106.1. XM_006222044.1.
    XP_006222107.1. XM_006222045.1.
    XP_006222108.1. XM_006222046.1.
    XP_006252466.1. XM_006252404.1.
    XP_006252467.1. XM_006252405.1.
    XP_006252468.1. XM_006252406.1.
    XP_224451.3. XM_224451.7.

    3D structure databases

    ProteinModelPortali D3ZU21.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000036350 ; ENSRNOP00000037643 ; ENSRNOG00000009208 .
    GeneIDi 306104.
    KEGGi rno:306104.
    UCSCi RGD:1305077. rat.

    Organism-specific databases

    CTDi 10464.
    RGDi 1305077. Pibf1.

    Phylogenomic databases

    GeneTreei ENSGT00390000015293.
    KOi K16538.
    OMAi EYENKLH.
    OrthoDBi EOG7B8S3C.
    PhylomeDBi D3ZU21.
    TreeFami TF329068.

    Miscellaneous databases

    NextBioi 655504.
    PROi D3ZU21.

    Family and domain databases

    InterProi IPR026205. PIBF1.
    [Graphical view ]
    PANTHERi PTHR18950. PTHR18950. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. "Quantitative phosphoproteomics of vasopressin-sensitive renal cells: regulation of aquaporin-2 phosphorylation at two sites."
      Hoffert J.D., Pisitkun T., Wang G., Shen R.F., Knepper M.A.
      Proc. Natl. Acad. Sci. U.S.A. 103:7159-7164(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZU21_RAT
    AccessioniPrimary (citable) accession number: D3ZU21
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3