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Protein
Submitted name:

Progesterone immunomodulatory-binding factor 1

Gene

Pibf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Progesterone immunomodulatory-binding factor 1Imported
Gene namesi
Name:Pibf1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi1305077 Pibf1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD3ZU21
PeptideAtlasiD3ZU21

PTM databases

iPTMnetiD3ZU21
PhosphoSitePlusiD3ZU21

Expressioni

Gene expression databases

BgeeiENSRNOG00000009208

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000037643

Structurei

3D structure databases

ProteinModelPortaliD3ZU21
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili78 – 105Sequence analysisAdd BLAST28
Coiled coili128 – 162Sequence analysisAdd BLAST35
Coiled coili191 – 246Sequence analysisAdd BLAST56
Coiled coili264 – 291Sequence analysisAdd BLAST28
Coiled coili299 – 319Sequence analysisAdd BLAST21
Coiled coili327 – 361Sequence analysisAdd BLAST35
Coiled coili378 – 445Sequence analysisAdd BLAST68
Coiled coili474 – 501Sequence analysisAdd BLAST28
Coiled coili506 – 550Sequence analysisAdd BLAST45
Coiled coili584 – 618Sequence analysisAdd BLAST35
Coiled coili640 – 667Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IFCG Eukaryota
ENOG410YQJ9 LUCA
GeneTreeiENSGT00390000015293
InParanoidiD3ZU21
KOiK16538
OMAiYERENRN
OrthoDBiEOG091G02OD
PhylomeDBiD3ZU21
TreeFamiTF329068

Family and domain databases

InterProiView protein in InterPro
IPR026205 PIBF1
PANTHERiPTHR18950 PTHR18950, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZU21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRKIAKESK KVNISSSLES EDISLETTIH TDDVSSSEER EGKVKITRQL
60 70 80 90 100
IERKEILHNI QLLKIELSQK NMMIDNLKMD YLTKVEELEE KLNDALHQKQ
110 120 130 140 150
LLTLRLDNQL TIQQKDAKKY QELMKQEMET ILLRQKQLEE TNHQLREKAG
160 170 180 190 200
DVRRNLRDLE LTEEQYEKLK SFPEDQLSIP EFVSIRFYEL VNPLRKEIHE
210 220 230 240 250
LQVKKNELSE ELSTNKGQLK QLTETYEEAR RNHSELLTRC QRLALELADT
260 270 280 290 300
KQLVQQGDYR QENYDKVKSE RDALEQEVLE VRRKHEVLET SHIAQAKERN
310 320 330 340 350
ELSKEVSTLQ QTVTLLQKDK EYLNRQNMEL SVRCAHEEDR LERLQVQLEE
360 370 380 390 400
TKRAREEMYE KYVTSRDHYK TEYENKLHDE LEQIKLKTNL EIDQLRSASR
410 420 430 440 450
EMYERENRNL REARDNALAE KNRAVTAEKD ALEKHEQLLD RYRELQLSTE
460 470 480 490 500
SKVSEFLHQS KLKSFESERV QLLQEETARN LTQCQLECEK YQKKLEVLTK
510 520 530 540 550
EFYSLQASSE KRITELEAQN SEHQARLDIY EKLEKELDEI IMQTAEIENE
560 570 580 590 600
DEAERILYSY GYGANVPTTA KRRLKQSVHL ARRVLQLEKQ NSSILKDLDH
610 620 630 640 650
QKEEVRQLSQ ELDRANSLLN QSQQPYRYLI ESVRQRDSKI DSLMKCTAQL
660 670 680 690 700
EKDVSNLNKE KSALLQTKNQ MALDLEQLLN HREEFAAMKQ IIINMCSKHS
710 720 730 740 750
ENNLLLTKVE SKSVTENQAS RPLTMPREHE ENVFIPKPTL FTKKEAQEWP

KNQKMKA
Length:757
Mass (Da):89,793
Last modified:April 20, 2010 - v1
Checksum:i06F1A165903CB7D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07019011 Genomic DNA No translation available.
AABR07019012 Genomic DNA No translation available.
AABR07019013 Genomic DNA No translation available.
AABR07019014 Genomic DNA No translation available.
AABR07019015 Genomic DNA No translation available.
RefSeqiNP_001292348.1, NM_001305419.1
XP_006252467.1, XM_006252405.3
XP_006252468.1, XM_006252406.3
XP_224451.3, XM_224451.8
UniGeneiRn.83881

Genome annotation databases

EnsembliENSRNOT00000036350; ENSRNOP00000037643; ENSRNOG00000009208
GeneIDi306104
KEGGirno:306104
UCSCiRGD:1305077 rat

Similar proteinsi

Entry informationi

Entry nameiD3ZU21_RAT
AccessioniPrimary (citable) accession number: D3ZU21
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: March 28, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health