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Protein
Submitted name:

Protein Prox1

Gene

Prox1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Prox1Imported
Gene namesi
Name:Prox1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494 Componenti: Chromosome 13

Organism-specific databases

RGDi1306890. Prox1.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: Ensembl
  • nucleus Source: RGD
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004905.

Family & Domainsi

Phylogenomic databases

OMAiGNVQMPS.
OrthoDBiEOG7MSMNK.
TreeFamiTF316638.

Family and domain databases

InterProiIPR007738. Prox1.
[Graphical view]
PANTHERiPTHR12198. PTHR12198. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZU00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPFPGATII SQLLKNNMNK NGGTEPSFQA SGLSSTGSEV HQEDICSNSS
60 70 80 90 100
RDSPPECLSP FGRPTMSQFD VDRLCDEHLR AKRARVENII RGMSHSPSVA
110 120 130 140 150
LRGNENEREM APQSVSPRES YRENKRKQKL PQQQQQSFQQ LVSARKEQKR
160 170 180 190 200
EERRQLKQQL EDMQKQLRQL QEKFYQVYDS TDSENDEDGD LSEDSMRSEI
210 220 230 240 250
LDARAQDSVG RSDNEMCELD PGQFIDRARA LIREQEMAEN KPKREGSNKE
260 270 280 290 300
RDHGPNSLQP EGKHLAETLK QELNTAMSQV VDTVVKVFSA KPSRQVPQVF
310 320 330 340 350
PPLQIPQARF AVNGENHNFH TANQRLQCFG DVIIPNPLDT FGNVQMPSST
360 370 380 390 400
DQTEALPLVV RKNSSEQSAS GPATGGHHQP LHQSPLSATA GFTTPSFRHP
410 420 430 440 450
FPLPLMAYPF QSPLGAPSGS FSGKDRASPE SLDLTRDTTS LRTKMSSHHL
460 470 480 490 500
SHHPCSPAHP PSTAEGLSLS LIKSECGDLQ DMSDISPYSG SAMQEGLSPN
510 520 530 540 550
HLKKAKLMFF YTRYPSSNML KTYFSDVKFN RCITSQLIKW FSNFREFYYI
560 570 580 590 600
QMEKYARQAI NDGVTSTEEL SITRDCELYR ALNMHYNKAN DFEVPERFLE
610 620 630 640 650
VAQITLREFF NAIIAGKDVD PSWKKAIYKV ICKLDSEVPE IFKSPNCLQE

LLHE
Length:654
Mass (Da):73,913
Last modified:July 22, 2015 - v2
Checksum:iA6359C4D034D83AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07022109 Genomic DNA. No translation available.
AABR07022110 Genomic DNA. No translation available.
AABR07022111 Genomic DNA. No translation available.
AABR07022112 Genomic DNA. No translation available.
RefSeqiNP_001100671.1. NM_001107201.1.
UniGeneiRn.26557.

Genome annotation databases

EnsembliENSRNOT00000004905; ENSRNOP00000004905; ENSRNOG00000003694.
GeneIDi305066.
KEGGirno:305066.
UCSCiRGD:1306890. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07022109 Genomic DNA. No translation available.
AABR07022110 Genomic DNA. No translation available.
AABR07022111 Genomic DNA. No translation available.
AABR07022112 Genomic DNA. No translation available.
RefSeqiNP_001100671.1. NM_001107201.1.
UniGeneiRn.26557.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004905.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000004905; ENSRNOP00000004905; ENSRNOG00000003694.
GeneIDi305066.
KEGGirno:305066.
UCSCiRGD:1306890. rat.

Organism-specific databases

CTDi5629.
RGDi1306890. Prox1.

Phylogenomic databases

OMAiGNVQMPS.
OrthoDBiEOG7MSMNK.
TreeFamiTF316638.

Miscellaneous databases

NextBioi654030.

Family and domain databases

InterProiIPR007738. Prox1.
[Graphical view]
PANTHERiPTHR12198. PTHR12198. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.
  3. "Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues."
    Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C., Olsen J.V.
    Nat. Commun. 3:876-876(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiD3ZU00_RAT
AccessioniPrimary (citable) accession number: D3ZU00
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: July 22, 2015
This is version 45 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.