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Protein
Submitted name:

Protein Prox1

Gene

Prox1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Prox1Imported
Gene namesi
Name:Prox1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 13

Organism-specific databases

RGDi1306890. Prox1.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: Ensembl
  • nucleus Source: RGD
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiD3ZU00.
PeptideAtlasiD3ZU00.

PTM databases

PhosphoSitePlusiD3ZU00.

Expressioni

Gene expression databases

BgeeiENSRNOG00000003694.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004905.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini497 – 649HPDInterPro annotationAdd BLAST153

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili139 – 173Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3779. Eukaryota.
ENOG410ZE21. LUCA.
GeneTreeiENSGT00530000063507.
OMAiFQIYDST.
OrthoDBiEOG091G02KS.
TreeFamiTF316638.

Family and domain databases

Gene3Di1.10.10.500. 1 hit.
InterProiIPR023082. Homeo_prospero_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF05044. HPD. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZU00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPFPGATII SQLLKNNMNK NGGTEPSFQA SGLSSTGSEV HQEDICSNSS
60 70 80 90 100
RDSPPECLSP FGRPTMSQFD VDRLCDEHLR AKRARVENII RGMSHSPSVA
110 120 130 140 150
LRGNENEREM APQSVSPRES YRENKRKQKL PQQQQQSFQQ LVSARKEQKR
160 170 180 190 200
EERRQLKQQL EDMQKQLRQL QEKFYQVYDS TDSENDEDGD LSEDSMRSEI
210 220 230 240 250
LDARAQDSVG RSDNEMCELD PGQFIDRARA LIREQEMAEN KPKREGSNKE
260 270 280 290 300
RDHGPNSLQP EGKHLAETLK QELNTAMSQV VDTVVKVFSA KPSRQVPQVF
310 320 330 340 350
PPLQIPQARF AVNGENHNFH TANQRLQCFG DVIIPNPLDT FGNVQMPSST
360 370 380 390 400
DQTEALPLVV RKNSSEQSAS GPATGGHHQP LHQSPLSATA GFTTPSFRHP
410 420 430 440 450
FPLPLMAYPF QSPLGAPSGS FSGKDRASPE SLDLTRDTTS LRTKMSSHHL
460 470 480 490 500
SHHPCSPAHP PSTAEGLSLS LIKSECGDLQ DMSDISPYSG SAMQEGLSPN
510 520 530 540 550
HLKKAKLMFF YTRYPSSNML KTYFSDVKFN RCITSQLIKW FSNFREFYYI
560 570 580 590 600
QMEKYARQAI NDGVTSTEEL SITRDCELYR ALNMHYNKAN DFEVPERFLE
610 620 630 640 650
VAQITLREFF NAIIAGKDVD PSWKKAIYKV ICKLDSEVPE IFKSPNCLQE

LLHE
Length:654
Mass (Da):73,913
Last modified:July 22, 2015 - v2
Checksum:iA6359C4D034D83AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07022109 Genomic DNA. No translation available.
AABR07022110 Genomic DNA. No translation available.
AABR07022111 Genomic DNA. No translation available.
AABR07022112 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000004905; ENSRNOP00000004905; ENSRNOG00000003694.
UCSCiRGD:1306890. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07022109 Genomic DNA. No translation available.
AABR07022110 Genomic DNA. No translation available.
AABR07022111 Genomic DNA. No translation available.
AABR07022112 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004905.

PTM databases

PhosphoSitePlusiD3ZU00.

Proteomic databases

PaxDbiD3ZU00.
PeptideAtlasiD3ZU00.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000004905; ENSRNOP00000004905; ENSRNOG00000003694.
UCSCiRGD:1306890. rat.

Organism-specific databases

RGDi1306890. Prox1.

Phylogenomic databases

eggNOGiKOG3779. Eukaryota.
ENOG410ZE21. LUCA.
GeneTreeiENSGT00530000063507.
OMAiFQIYDST.
OrthoDBiEOG091G02KS.
TreeFamiTF316638.

Gene expression databases

BgeeiENSRNOG00000003694.

Family and domain databases

Gene3Di1.10.10.500. 1 hit.
InterProiIPR023082. Homeo_prospero_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF05044. HPD. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZU00_RAT
AccessioniPrimary (citable) accession number: D3ZU00
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: November 2, 2016
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.