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Protein
Submitted name:

Protein Tmem59

Gene

Tmem59

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Tmem59Imported
Submitted name:
RCG50292, isoform CRA_aImported
Gene namesi
Name:Tmem59Imported
Synonyms:RGD1310313Imported
ORF Names:rCG_50292Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1310313. Tmem59.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei240 – 26526HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434Sequence analysisAdd
BLAST
Chaini35 – 323289Sequence analysisPRO_5007912892Add
BLAST

Expressioni

Gene expression databases

BgeeiENSRNOG00000009778.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000013224.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IIST. Eukaryota.
ENOG410XTCW. LUCA.
GeneTreeiENSGT00390000008279.
OMAiYGDLEYM.
OrthoDBiEOG091G0EVN.
TreeFamiTF331226.

Family and domain databases

InterProiIPR022065. Uncharacterised_TMEM59.
[Graphical view]
PfamiPF12280. BSMAP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZTP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAPKGKLWV QAQVGLPPLL LLTMALAGGS GTAAAEAFDS VLGDTASCHR
60 70 80 90 100
ACQLTYPLHT YPKEEELYAC QRGCRLFSIC QFVDDGIDLN RTKLECESAC
110 120 130 140 150
TEAYSQPDEQ YACHLGCQDQ LPFAELRQEQ LMSLMPRMHL LFPLTLVRSF
160 170 180 190 200
WSDMMDSAQS FITSSWTFYL QADDGKIVIF QSKPEIQYAP QLEQEPADLR
210 220 230 240 250
QSSLSKMSYL QMRNSQAHRN YLEDEESDGF LRCLSLNSGW ILTTTLVLSV
260 270 280 290 300
MVLLWICCAA VATAVEQYVP PEKLSIYGDL EFMNEQKLSR YPAPSLVVVR
310 320
SQTEEHEEAG PLPTKVNLAH SEI
Length:323
Mass (Da):36,241
Last modified:April 20, 2010 - v1
Checksum:i1528DD1B1A99D07F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC114866 Genomic DNA. No translation available.
CH474008 Genomic DNA. Translation: EDL90443.1.
RefSeqiNP_001132937.1. NM_001139465.2.
UniGeneiRn.105907.

Genome annotation databases

EnsembliENSRNOT00000013224; ENSRNOP00000013224; ENSRNOG00000009778.
GeneIDi100196907.
KEGGirno:100196907.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC114866 Genomic DNA. No translation available.
CH474008 Genomic DNA. Translation: EDL90443.1.
RefSeqiNP_001132937.1. NM_001139465.2.
UniGeneiRn.105907.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000013224.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000013224; ENSRNOP00000013224; ENSRNOG00000009778.
GeneIDi100196907.
KEGGirno:100196907.

Organism-specific databases

CTDi9528.
RGDi1310313. Tmem59.

Phylogenomic databases

eggNOGiENOG410IIST. Eukaryota.
ENOG410XTCW. LUCA.
GeneTreeiENSGT00390000008279.
OMAiYGDLEYM.
OrthoDBiEOG091G0EVN.
TreeFamiTF331226.

Gene expression databases

BgeeiENSRNOG00000009778.

Family and domain databases

InterProiIPR022065. Uncharacterised_TMEM59.
[Graphical view]
PfamiPF12280. BSMAP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZTP3_RAT
AccessioniPrimary (citable) accession number: D3ZTP3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 7, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.