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Protein
Submitted name:

Pentraxin 3

Gene

Ptx3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Submitted name:
Pentraxin 3Imported
Submitted name:
RCG62682Imported
Gene namesi
Name:Ptx3Imported
ORF Names:rCG_62682Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1593476. Ptx3.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_501193741918 – 381Sequence analysisAdd BLAST364

Expressioni

Gene expression databases

BgeeiENSRNOG00000012280.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000016541.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini205 – 346LamGLInterPro annotationAdd BLAST142

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili117 – 137Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IHCT. Eukaryota.
ENOG410XRG6. LUCA.
GeneTreeiENSGT00760000119128.
OMAiWLPAGCE.
OrthoDBiEOG091G0AHP.
TreeFamiTF330208.

Family and domain databases

InterProiView protein in InterPro
IPR013320. ConA-like_dom_sf.
IPR006558. LamG-like.
IPR030476. Pentaxin_CS.
IPR001759. Pentraxin-related.
PfamiView protein in Pfam
PF00354. Pentaxin. 1 hit.
PRINTSiPR00895. PENTAXIN.
SMARTiView protein in SMART
SM00560. LamGL. 1 hit.
SM00159. PTX. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiView protein in PROSITE
PS00289. PTX_1. 1 hit.
PS51828. PTX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZT94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHLPVILLCA LWSAVLAETS YDYELMHVNL DNEIDNGLHP TEDPTPCDCR
60 70 80 90 100
QEHSEWDKLF IMLENSQMRE AMLLQATDDV LRGELQRLRA ELGRLAGGMA
110 120 130 140 150
RPCSASGPAD ARLAQALEPL LQESRDANRR LARLEDAEAR RHEATVPSLG
160 170 180 190 200
AVLEELQRTR ADLSAMQSWV ARHWLPAGCE TAIFFPMRSK KIFGSVHPVR
210 220 230 240 250
PMKLESFSAC IWVKATDVLN KTILFSYGTK WNPYEIQLYL SSQSLVFVVG
260 270 280 290 300
GKENKLAADT VVSLGRWSHL CGTWSSEQGS MSLWANGELV ATTLEMAKSH
310 320 330 340 350
PVPEGGLLQI GQEKNGCCVG GGFDETLAFS GRITGFNIWD RVLSKEEIRA
360 370 380
SGGAESCHIR GNIVGWGVTE IQAHGGAQYV S
Length:381
Mass (Da):42,051
Last modified:April 20, 2010 - v1
Checksum:iE56A356FE1BC028D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07011109 Genomic DNA. No translation available.
CH473976 Genomic DNA. Translation: EDM00934.1.
RefSeqiNP_001103006.1. NM_001109536.1.
UniGeneiRn.218702.

Genome annotation databases

EnsembliENSRNOT00000016541; ENSRNOP00000016541; ENSRNOG00000012280.
GeneIDi689388.
KEGGirno:689388.
UCSCiRGD:1593476. rat.

Similar proteinsi

Entry informationi

Entry nameiD3ZT94_RAT
AccessioniPrimary (citable) accession number: D3ZT94
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: January 31, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Keywords - Technical termi

Complete proteome, Reference proteomeImported