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D3ZSN1

- D3ZSN1_RAT

UniProt

D3ZSN1 - D3ZSN1_RAT

Protein
Submitted name:

Protein Vom2r59

Gene

Vom2r59

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. G-protein coupled receptor activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    G-protein coupled receptorSAAS annotation, Receptor, Transducer

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Vom2r59Imported
    Gene namesi
    Name:Vom2r59Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 12

    Organism-specific databases

    RGDi1566381. Vom2r59.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell membraneSAAS annotation, Membrane

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00740000114881.
    OMAiTEDERYH.
    OrthoDBiEOG7ZPNJF.
    TreeFamiTF340115.

    Family and domain databases

    InterProiIPR001828. ANF_lig-bd_rcpt.
    IPR000337. GPCR_3.
    IPR011500. GPCR_3_9-Cys_dom.
    IPR017978. GPCR_3_C.
    IPR004073. GPCR_3_vmron_rcpt_2.
    IPR028082. Peripla_BP_I.
    [Graphical view]
    PfamiPF00003. 7tm_3. 1 hit.
    PF01094. ANF_receptor. 1 hit.
    PF07562. NCD3G. 1 hit.
    [Graphical view]
    PRINTSiPR00248. GPCRMGR.
    PR01535. VOMERONASL2R.
    SUPFAMiSSF53822. SSF53822. 1 hit.
    PROSITEiPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZSN1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMLLLIFMFL LLQYSNDVYS FDRSYCASRT KTSVYKDGDM VVAAFLPLFT    50
    ITVDSASDNQ SNNNFHIQFN LKNYQIVLAM VYAIEEINRN PHILPNVSLG 100
    YDIYNVLFNE WFTLHRCISW LSGPKKYVPN YTCRREMKSI AALTGISWII 150
    STDIRTLLEL YRYPQLTIGS FDPNLNNHEQ FHDIYQIAYK DMSLTHGIVS 200
    LLNYFHWNWV GLIVSEGQNG FQIISEVRAE MDRNKICLDF VELIRVSEVS 250
    YLPSYLLNPT HLAKLTANVI ITYGDSDFLR GFMFYSRQIF VTRKVWIMNS 300
    DWDIITQSQH FILHSLHGSL IFAHHHKETS GYRNFIQTVH PSKYPEDFYL 350
    TRFWFYFFNC SFADDDCSTL ENCLPNASLH ETPGNRFDMV MTEFAYNMYN 400
    AVYAVAHSLH KMLLHEVEVR EVRKAEDLIF SAWQLHPFLK NMQFTNPAGE 450
    QVTLDEKMKL NAEYDILNYW NFPEGLHLKV KVGQFSPYGP LDQQLSLSED 500
    IIEWPTEITE TPRSVCSESC GPGFRKSLPE GKRICCFDCI PCPENEISNE 550
    TDVDQCMQCL DHQYANTAQN HCLQKSMTFL HYEDPMGISL SCIALCFSAL 600
    TSLVLGIFLK QKNTPIVKAN NRTLTYILLI ALNFCFLCSF LFIGHPNTVT 650
    CILQQTTFAV VFTVAVSTVL AKTITVVLAF KVTAPGRRIR WLLVTRAPNF 700
    IVPICTLIQI ILCGVWLGNS PPFIDTDTHS ENEHIIIMCN KGSVTAFYCV 750
    LGYLGALALG SFTLAFLARN LPDTFNEAKF LTFSMLVFCS VWVTFLPVYH 800
    STKGKHMVVV EVFSILVSSA GLLGCIFAPK CYIILLRPQR NSLQSHRHKI 850
    HYKYMTY 857
    Length:857
    Mass (Da):98,497
    Last modified:April 3, 2013 - v2
    Checksum:i124B2197EF111DFB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06069998 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000042692; ENSRNOP00000047784; ENSRNOG00000045674.
    UCSCiRGD:1566381. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06069998 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000042692 ; ENSRNOP00000047784 ; ENSRNOG00000045674 .
    UCSCi RGD:1566381. rat.

    Organism-specific databases

    RGDi 1566381. Vom2r59.

    Phylogenomic databases

    GeneTreei ENSGT00740000114881.
    OMAi TEDERYH.
    OrthoDBi EOG7ZPNJF.
    TreeFami TF340115.

    Miscellaneous databases

    NextBioi 628061.

    Family and domain databases

    InterProi IPR001828. ANF_lig-bd_rcpt.
    IPR000337. GPCR_3.
    IPR011500. GPCR_3_9-Cys_dom.
    IPR017978. GPCR_3_C.
    IPR004073. GPCR_3_vmron_rcpt_2.
    IPR028082. Peripla_BP_I.
    [Graphical view ]
    Pfami PF00003. 7tm_3. 1 hit.
    PF01094. ANF_receptor. 1 hit.
    PF07562. NCD3G. 1 hit.
    [Graphical view ]
    PRINTSi PR00248. GPCRMGR.
    PR01535. VOMERONASL2R.
    SUPFAMi SSF53822. SSF53822. 1 hit.
    PROSITEi PS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZSN1_RAT
    AccessioniPrimary (citable) accession number: D3ZSN1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 36 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3