Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D3ZSN1 (D3ZSN1_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length857 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSRNOP00000047784

Sequences

Sequence LengthMass (Da)Tools
D3ZSN1 [UniParc].

Last modified April 3, 2013. Version 2.
Checksum: 124B2197EF111DFB

FASTA85798,497
        10         20         30         40         50         60 
MMLLLIFMFL LLQYSNDVYS FDRSYCASRT KTSVYKDGDM VVAAFLPLFT ITVDSASDNQ 

        70         80         90        100        110        120 
SNNNFHIQFN LKNYQIVLAM VYAIEEINRN PHILPNVSLG YDIYNVLFNE WFTLHRCISW 

       130        140        150        160        170        180 
LSGPKKYVPN YTCRREMKSI AALTGISWII STDIRTLLEL YRYPQLTIGS FDPNLNNHEQ 

       190        200        210        220        230        240 
FHDIYQIAYK DMSLTHGIVS LLNYFHWNWV GLIVSEGQNG FQIISEVRAE MDRNKICLDF 

       250        260        270        280        290        300 
VELIRVSEVS YLPSYLLNPT HLAKLTANVI ITYGDSDFLR GFMFYSRQIF VTRKVWIMNS 

       310        320        330        340        350        360 
DWDIITQSQH FILHSLHGSL IFAHHHKETS GYRNFIQTVH PSKYPEDFYL TRFWFYFFNC 

       370        380        390        400        410        420 
SFADDDCSTL ENCLPNASLH ETPGNRFDMV MTEFAYNMYN AVYAVAHSLH KMLLHEVEVR 

       430        440        450        460        470        480 
EVRKAEDLIF SAWQLHPFLK NMQFTNPAGE QVTLDEKMKL NAEYDILNYW NFPEGLHLKV 

       490        500        510        520        530        540 
KVGQFSPYGP LDQQLSLSED IIEWPTEITE TPRSVCSESC GPGFRKSLPE GKRICCFDCI 

       550        560        570        580        590        600 
PCPENEISNE TDVDQCMQCL DHQYANTAQN HCLQKSMTFL HYEDPMGISL SCIALCFSAL 

       610        620        630        640        650        660 
TSLVLGIFLK QKNTPIVKAN NRTLTYILLI ALNFCFLCSF LFIGHPNTVT CILQQTTFAV 

       670        680        690        700        710        720 
VFTVAVSTVL AKTITVVLAF KVTAPGRRIR WLLVTRAPNF IVPICTLIQI ILCGVWLGNS 

       730        740        750        760        770        780 
PPFIDTDTHS ENEHIIIMCN KGSVTAFYCV LGYLGALALG SFTLAFLARN LPDTFNEAKF 

       790        800        810        820        830        840 
LTFSMLVFCS VWVTFLPVYH STKGKHMVVV EVFSILVSSA GLLGCIFAPK CYIILLRPQR 

       850 
NSLQSHRHKI HYKYMTY 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
Rat Genome Sequencing Project Consortium
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. expand/collapse author list , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Brown Norway Ensembl ENSRNOP00000047784.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Brown Norway Ensembl ENSRNOP00000047784.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AABR06069998 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000042692; ENSRNOP00000047784; ENSRNOG00000045674.
UCSCRGD:1566381. rat.

Organism-specific databases

RGD1566381. Vom2r59.

Phylogenomic databases

GeneTreeENSGT00740000114881.
OMATEDERYH.
OrthoDBEOG7ZPNJF.
TreeFamTF340115.

Family and domain databases

InterProIPR001828. ANF_lig-bd_rcpt.
IPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR004073. GPCR_3_vmron_rcpt_2.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSPR00248. GPCRMGR.
PR01535. VOMERONASL2R.
SUPFAMSSF53822. SSF53822. 1 hit.
PROSITEPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio628061.

Entry information

Entry nameD3ZSN1_RAT
AccessionPrimary (citable) accession number: D3ZSN1
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: May 14, 2014
This is version 35 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)