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D3ZSA9

- D3ZSA9_RAT

UniProt

D3ZSA9 - D3ZSA9_RAT

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Protein
Submitted name:

Protein Nomo1

Gene

Nomo1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. carbohydrate binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Nomo1Imported
Submitted name:
Similar to pM5 protein; DNA segment, Chr 7, ERATO Doi 156, expressed (Predicted)Imported
Gene namesi
Name:Nomo1Imported
Synonyms:RGD1305240_predictedImported
ORF Names:rCG_53862Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 1

Organism-specific databases

RGDi1305240. Nomo1.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000000089.
OMAiEFSYWAR.
OrthoDBiEOG77M8NC.
TreeFamiTF313696.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1120. 2 hits.
InterProiIPR013784. Carb-bd-like_fold.
IPR008969. CarboxyPept-like_regulatory.
IPR014766. CarboxyPept_regulatory_dom.
IPR013783. Ig-like_fold.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 3 hits.
SSF49464. SSF49464. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZSA9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRAGRCAAVL LLLLLSGPGR AIGSEDIVVG CGGFVKSDVE INYSLIEIKL
60 70 80 90 100
YTKHGTLKYQ TDCAPNNGYF MIPLYDKGDF ILKIEPPLGW SFEPTNVELH
110 120 130 140 150
VDGVSDVCTR GGDINFVFTG FSVNGKVLSK GQPLGPAGVQ VSLRSTGADS
160 170 180 190 200
KIQSTVTQPG GKFAFFKVLP GDYEILATHP TWALKEASTT VRVTNSNANA
210 220 230 240 250
AGPLIVAGYN VSGSVRSDGE PMKGVKFLLF SSLVNKEDVL GCNVSPVSGF
260 270 280 290 300
QPPDESLVYL CYAVSKEDGS FSFYSLPSGG YTVVPFYRGE RITFDVAPSR
310 320 330 340 350
LDFTVEHDSL RIEPVFHVMG FSVTGRVLNG PDGEGVPEAV VTLNNQIKVR
360 370 380 390 400
TKADGSFRLE NITTGTYTIH AQKEHLYFDM VTIKIAPNTP QLADLIATGF
410 420 430 440 450
SICGQISIIR SPDTIKQMNK YKVVLSSQDK DKALVTVETD AHGSFCFKAK
460 470 480 490 500
PGIYKVQVVV PEAETRAGLM LKPQTFPITV TNKPVMDVAF VQFLASVSGK
510 520 530 540 550
VSCLDTCGDL LVTLQSLSRQ GEKRSLQLSG KVNSMTFTFD KVLPGKYKIS
560 570 580 590 600
IMHEDWCWRN KSLEVEVLED DVSAVEFRQT GYMLRCALSH AITLEFHQDG
610 620 630 640 650
NGPENVGIYN LSRGVNRFCL SKPGVYKVTP RSCHRFEQAF YTYDTSSPSI
660 670 680 690 700
LTLTAIRHHV LGTIITDKMM DVTVTIKSSI DSEPALVLGP LKSAQELRRE
710 720 730 740 750
QQLAEIETRR QEREKNGKEE GEEGRARPPG QEMVDELQGP FSYDFSYWAR
760 770 780 790 800
CGEKITVTPS SKELLFYPPS MEATVSGESC PGKLIEIHGK AGLFLEGQIH
810 820 830 840 850
PELEGVEIVI SEKGASSPLI TVFTDDKGAY SVGPLHSDLE YTVTSQKEGF
860 870 880 890 900
VLTAVEGTVG DFKAYALAGV SFEIKAEDDQ PLPGVLLSLS GGVFRSNLLT
910 920 930 940 950
QDNGILTFSN LSPGQYYFKP MMKEFRFEPS SQMIEVQEGQ NLRITITGFR
960 970 980 990 1000
TAYSCYGTVS SLNGEPEQGV AVEAVGQKDC SIYGEDTVTD EEGKFRLRGL
1010 1020 1030 1040 1050
LPGCMYHVQL KAEGNDHIER ALPHHRVIEV GNNDVDDVNI IVFRQINQFD
1060 1070 1080 1090 1100
LSGNVITSSE YLSTLWVKLY KSESLDNPIQ TVSLGQSLFF HFPPLLRDGE
1110 1120 1130 1140 1150
NYVVLLDSTL PRSQYDYVLP QVSFAAVGYH KHITLVFSPT RKLPEQDIAQ
1160 1170 1180 1190 1200
GSYIALPLTL LLLLAGYNHD KLIPLLLQLT SRLQGVRALG QAASDSSGPE
1210
DMKRQTKKQK TRRT
Length:1,214
Mass (Da):133,443
Last modified:April 20, 2010 - v1
Checksum:i1A817B637B113C69
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06004829 Genomic DNA. No translation available.
CH473979 Genomic DNA. Translation: EDM07275.1.
RefSeqiNP_001101954.1. NM_001108484.1.
UniGeneiRn.8989.

Genome annotation databases

EnsembliENSRNOT00000028680; ENSRNOP00000028680; ENSRNOG00000021118.
GeneIDi361578.
KEGGirno:361578.
UCSCiRGD:1305240. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06004829 Genomic DNA. No translation available.
CH473979 Genomic DNA. Translation: EDM07275.1 .
RefSeqi NP_001101954.1. NM_001108484.1.
UniGenei Rn.8989.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000028680 ; ENSRNOP00000028680 ; ENSRNOG00000021118 .
GeneIDi 361578.
KEGGi rno:361578.
UCSCi RGD:1305240. rat.

Organism-specific databases

CTDi 23420.
RGDi 1305240. Nomo1.

Phylogenomic databases

GeneTreei ENSGT00390000000089.
OMAi EFSYWAR.
OrthoDBi EOG77M8NC.
TreeFami TF313696.

Miscellaneous databases

NextBioi 676790.
PROi D3ZSA9.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1120. 2 hits.
InterProi IPR013784. Carb-bd-like_fold.
IPR008969. CarboxyPept-like_regulatory.
IPR014766. CarboxyPept_regulatory_dom.
IPR013783. Ig-like_fold.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 3 hits.
SSF49464. SSF49464. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZSA9_RAT
AccessioniPrimary (citable) accession number: D3ZSA9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 1, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3