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D3ZSA9

- D3ZSA9_RAT

UniProt

D3ZSA9 - D3ZSA9_RAT

Protein
Submitted name:

Protein Nomo1

Gene

Nomo1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Nomo1Imported
    Submitted name:
    Similar to pM5 protein; DNA segment, Chr 7, ERATO Doi 156, expressed (Predicted)Imported
    Gene namesi
    Name:Nomo1Imported
    Synonyms:RGD1305240_predictedImported
    ORF Names:rCG_53862Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 1

    Organism-specific databases

    RGDi1305240. Nomo1.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000000089.
    OMAiEFSYWAR.
    OrthoDBiEOG77M8NC.
    TreeFamiTF313696.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1120. 2 hits.
    InterProiIPR013784. Carb-bd-like_fold.
    IPR008969. CarboxyPept-like_regulatory.
    IPR014766. CarboxyPept_regulatory_dom.
    IPR013783. Ig-like_fold.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 3 hits.
    SSF49464. SSF49464. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D3ZSA9-1 [UniParc]FASTAAdd to Basket

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    MRAGRCAAVL LLLLLSGPGR AIGSEDIVVG CGGFVKSDVE INYSLIEIKL     50
    YTKHGTLKYQ TDCAPNNGYF MIPLYDKGDF ILKIEPPLGW SFEPTNVELH 100
    VDGVSDVCTR GGDINFVFTG FSVNGKVLSK GQPLGPAGVQ VSLRSTGADS 150
    KIQSTVTQPG GKFAFFKVLP GDYEILATHP TWALKEASTT VRVTNSNANA 200
    AGPLIVAGYN VSGSVRSDGE PMKGVKFLLF SSLVNKEDVL GCNVSPVSGF 250
    QPPDESLVYL CYAVSKEDGS FSFYSLPSGG YTVVPFYRGE RITFDVAPSR 300
    LDFTVEHDSL RIEPVFHVMG FSVTGRVLNG PDGEGVPEAV VTLNNQIKVR 350
    TKADGSFRLE NITTGTYTIH AQKEHLYFDM VTIKIAPNTP QLADLIATGF 400
    SICGQISIIR SPDTIKQMNK YKVVLSSQDK DKALVTVETD AHGSFCFKAK 450
    PGIYKVQVVV PEAETRAGLM LKPQTFPITV TNKPVMDVAF VQFLASVSGK 500
    VSCLDTCGDL LVTLQSLSRQ GEKRSLQLSG KVNSMTFTFD KVLPGKYKIS 550
    IMHEDWCWRN KSLEVEVLED DVSAVEFRQT GYMLRCALSH AITLEFHQDG 600
    NGPENVGIYN LSRGVNRFCL SKPGVYKVTP RSCHRFEQAF YTYDTSSPSI 650
    LTLTAIRHHV LGTIITDKMM DVTVTIKSSI DSEPALVLGP LKSAQELRRE 700
    QQLAEIETRR QEREKNGKEE GEEGRARPPG QEMVDELQGP FSYDFSYWAR 750
    CGEKITVTPS SKELLFYPPS MEATVSGESC PGKLIEIHGK AGLFLEGQIH 800
    PELEGVEIVI SEKGASSPLI TVFTDDKGAY SVGPLHSDLE YTVTSQKEGF 850
    VLTAVEGTVG DFKAYALAGV SFEIKAEDDQ PLPGVLLSLS GGVFRSNLLT 900
    QDNGILTFSN LSPGQYYFKP MMKEFRFEPS SQMIEVQEGQ NLRITITGFR 950
    TAYSCYGTVS SLNGEPEQGV AVEAVGQKDC SIYGEDTVTD EEGKFRLRGL 1000
    LPGCMYHVQL KAEGNDHIER ALPHHRVIEV GNNDVDDVNI IVFRQINQFD 1050
    LSGNVITSSE YLSTLWVKLY KSESLDNPIQ TVSLGQSLFF HFPPLLRDGE 1100
    NYVVLLDSTL PRSQYDYVLP QVSFAAVGYH KHITLVFSPT RKLPEQDIAQ 1150
    GSYIALPLTL LLLLAGYNHD KLIPLLLQLT SRLQGVRALG QAASDSSGPE 1200
    DMKRQTKKQK TRRT 1214
    Length:1,214
    Mass (Da):133,443
    Last modified:April 20, 2010 - v1
    Checksum:i1A817B637B113C69
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06004829 Genomic DNA. No translation available.
    CH473979 Genomic DNA. Translation: EDM07275.1.
    RefSeqiNP_001101954.1. NM_001108484.1.
    UniGeneiRn.8989.

    Genome annotation databases

    EnsembliENSRNOT00000028680; ENSRNOP00000028680; ENSRNOG00000021118.
    GeneIDi361578.
    KEGGirno:361578.
    UCSCiRGD:1305240. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06004829 Genomic DNA. No translation available.
    CH473979 Genomic DNA. Translation: EDM07275.1 .
    RefSeqi NP_001101954.1. NM_001108484.1.
    UniGenei Rn.8989.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000028680 ; ENSRNOP00000028680 ; ENSRNOG00000021118 .
    GeneIDi 361578.
    KEGGi rno:361578.
    UCSCi RGD:1305240. rat.

    Organism-specific databases

    CTDi 23420.
    RGDi 1305240. Nomo1.

    Phylogenomic databases

    GeneTreei ENSGT00390000000089.
    OMAi EFSYWAR.
    OrthoDBi EOG77M8NC.
    TreeFami TF313696.

    Miscellaneous databases

    NextBioi 676790.
    PROi D3ZSA9.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1120. 2 hits.
    InterProi IPR013784. Carb-bd-like_fold.
    IPR008969. CarboxyPept-like_regulatory.
    IPR014766. CarboxyPept_regulatory_dom.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 3 hits.
    SSF49464. SSF49464. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZSA9_RAT
    AccessioniPrimary (citable) accession number: D3ZSA9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3