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D3ZRK7 (D3ZRK7_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Protein Cdc6 Ensembl ENSRNOP00000032177
Gene names
Name:Cdc6 RGD 1309157 Ensembl ENSRNOP00000032177
Synonyms:Cdc6_predicted EMBL EDM05961.1
ORF Names:rCG_34910 EMBL EDM05961.1
OrganismRattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000032177
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3ZRK7 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: DB442EA93D249296

FASTA56162,313
        10         20         30         40         50         60 
MPQTRSQTQA TIDFPKKKQS KTLSKTNSRD SEVKLRNVQP VPTTPCADIK ILPLSPRKRL 

        70         80         90        100        110        120 
GDDNLCNTPH LSPCSPPKLG RKENGPPRSH TRKGCRLIFD DELAVKASAP KEQDRVPQHQ 

       130        140        150        160        170        180 
ILSSAQRGQE SETNPEQKCP PEKESACMRL FKQEGTCYQQ AKLVLNTAVP DRLPAREQEM 

       190        200        210        220        230        240 
GVIRDFLKEH ICGKKAGSLY LSGAPGTGKT ACLSRILQDF KKEVKGFKTI VLNCMSLRNA 

       250        260        270        280        290        300 
QAVFPAIAQE IGREELCRPT GKDLMRKLEK HLTAERGPMI VLVLDEMDQL DSKGQDVLYT 

       310        320        330        340        350        360 
LFEWPWLSNS RLVLIGIANT LDLTDRILPR LEAREGCKPK LLNFPPYTRN QIAAILQDRL 

       370        380        390        400        410        420 
SQVSKDQVLD SAAIQFCARK VSAVSGDIRK ALDVCRRAIE IVESDVRSQT VLKPLSECKS 

       430        440        450        460        470        480 
PCESLVPKRV GLAHISQVIS GVDGNRVTLS QENTQDSLPL QQKILVCSLL LLTKRLKIKE 

       490        500        510        520        530        540 
VTLGKLYEAY SSVCRKQQVA AVDQSECLSL SGLLESRGIV GLKKNKESRL TKVSLKIEEK 

       550        560 
EIEHVLKGKA FIGNILAAGL P 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
Rat Genome Sequencing Project Consortium
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. expand/collapse author list , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Brown Norway Ensembl ENSRNOP00000032177.
[2]"Gene and alternative splicing annotation with AIR."
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G.
Genome Res. 15:54-66(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDM05961.1.
[3]Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. expand/collapse author list , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDM05961.1.
[4]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Brown Norway Ensembl ENSRNOP00000032177.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AABR06065511 Genomic DNA. No translation available.
CH473948 Genomic DNA. Translation: EDM05961.1.
CH473948 Genomic DNA. Translation: EDM05962.1.
RefSeqNP_001101768.1. NM_001108298.1.
XP_006247416.1. XM_006247354.1.
UniGeneRn.219688.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000038228; ENSRNOP00000032177; ENSRNOG00000027787.
GeneID360621.
KEGGrno:360621.

Organism-specific databases

CTD990.
RGD1309157. Cdc6.

Phylogenomic databases

GeneTreeENSGT00530000063498.
KOK02213.
OMAPYTRNQI.
OrthoDBEOG7QG44J.
PhylomeDBD3ZRK7.
TreeFamTF101051.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR015163. Cdc6_C_dom.
IPR016314. Cell_div_Cdc6/18.
IPR027417. P-loop_NTPase.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF09079. Cdc6_C. 1 hit.
[Graphical view]
PIRSFPIRSF001767. Cdc6. 1 hit.
SMARTSM00382. AAA. 1 hit.
SM01074. Cdc6_C. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Other

NextBio673491.
PROD3ZRK7.

Entry information

Entry nameD3ZRK7_RAT
AccessionPrimary (citable) accession number: D3ZRK7
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)