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D3ZR69

- D3ZR69_RAT

UniProt

D3ZR69 - D3ZR69_RAT

Protein
Submitted name:

Growth arrest-specific 2 like 1 (Predicted), isoform CRA_a

Gene

Gas2l1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. cell cycle arrest Source: InterPro
    2. cellular response to starvation Source: Ensembl
    3. cellular response to thyroid hormone stimulus Source: Ensembl
    4. microtubule bundle formation Source: Ensembl
    5. negative regulation of cell growth Source: Ensembl
    6. negative regulation of erythrocyte differentiation Source: Ensembl
    7. negative regulation of gene expression Source: Ensembl
    8. negative regulation of microtubule depolymerization Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Growth arrest-specific 2 like 1 (Predicted), isoform CRA_aImported
    Submitted name:
    Protein Gas2l1Imported
    Gene namesi
    Name:Gas2l1Imported
    Synonyms:Gas2l1_predictedImported
    ORF Names:rCG_36006Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 14

    Organism-specific databases

    RGDi1311206. Gas2l1.

    Subcellular locationi

    GO - Cellular componenti

    1. microtubule Source: Ensembl
    2. stress fiber Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000002205.
    OMAiILGRCSC.
    OrthoDBiEOG7VTDR1.

    Family and domain databases

    Gene3Di1.10.418.10. 1 hit.
    3.30.920.20. 1 hit.
    InterProiIPR001715. CH-domain.
    IPR003108. GAS2_dom.
    [Graphical view]
    PfamiPF00307. CH. 1 hit.
    PF02187. GAS2. 1 hit.
    [Graphical view]
    SMARTiSM00033. CH. 1 hit.
    SM00243. GAS2. 1 hit.
    [Graphical view]
    SUPFAMiSSF143575. SSF143575. 1 hit.
    SSF47576. SSF47576. 1 hit.
    PROSITEiPS50021. CH. 1 hit.
    PS51460. GAR. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZR69-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADPVAGIAG SAAKSVRPFR SSEAYVEAMK EDLADWLNAL YSLGLPGSGD    50
    GFLTGLATGT TLCQHANAVT KAARALAAAR PTRGVAFQAH SVAPGSFMAR 100
    DNVASFIGWC RAELGVPEVL MFETEDLVLR KNEKSVVLCL LEVARRGARL 150
    GLLAPRLVQF EQEIERELRA TPQASSVPAA EEDVTEIAAA PGAPARTPRM 200
    TPNDIRNLDE LVREILGKCT CPDQFPMIKV SEGKYRVGDS SLLIFVRVLR 250
    NHVMVRVGGG WDTLEHYLDK HDPCRCTSST HRLPQQRTGT FSPQRGSPTP 300
    SPRPGSPVPG SERRSSRPEV TPISLRSTKE GPETPLRSPG FWNHLQVCEL 350
    LLASRSRREW INSAPSLNLT AGRKAGTCLA ALPLGLCVLL GPAPEFSEVS 400
    FPSWAFLGVA RSIVGGAPLG PSECLCCF 428
    Length:428
    Mass (Da):46,041
    Last modified:April 20, 2010 - v1
    Checksum:i9384857282BDAC8A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06080282 Genomic DNA. No translation available.
    CH473963 Genomic DNA. Translation: EDM00264.1.
    RefSeqiNP_001101835.1. NM_001108365.1.
    UniGeneiRn.22169.

    Genome annotation databases

    EnsembliENSRNOT00000065135; ENSRNOP00000063743; ENSRNOG00000009040.
    GeneIDi360973.
    KEGGirno:360973.
    UCSCiRGD:1311206. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06080282 Genomic DNA. No translation available.
    CH473963 Genomic DNA. Translation: EDM00264.1 .
    RefSeqi NP_001101835.1. NM_001108365.1.
    UniGenei Rn.22169.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000065135 ; ENSRNOP00000063743 ; ENSRNOG00000009040 .
    GeneIDi 360973.
    KEGGi rno:360973.
    UCSCi RGD:1311206. rat.

    Organism-specific databases

    CTDi 10634.
    RGDi 1311206. Gas2l1.

    Phylogenomic databases

    GeneTreei ENSGT00390000002205.
    OMAi ILGRCSC.
    OrthoDBi EOG7VTDR1.

    Miscellaneous databases

    NextBioi 674770.

    Family and domain databases

    Gene3Di 1.10.418.10. 1 hit.
    3.30.920.20. 1 hit.
    InterProi IPR001715. CH-domain.
    IPR003108. GAS2_dom.
    [Graphical view ]
    Pfami PF00307. CH. 1 hit.
    PF02187. GAS2. 1 hit.
    [Graphical view ]
    SMARTi SM00033. CH. 1 hit.
    SM00243. GAS2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF143575. SSF143575. 1 hit.
    SSF47576. SSF47576. 1 hit.
    PROSITEi PS50021. CH. 1 hit.
    PS51460. GAR. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZR69_RAT
    AccessioniPrimary (citable) accession number: D3ZR69
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3