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Protein
Submitted name:

Protein Lilrb3

Gene

Lilrb3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Lilrb3Imported
Submitted name:
RCG56840Imported
Gene namesi
Name:Lilrb3Imported
ORF Names:rCG_56840Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi70895. Lilrb3.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119033.
OMAiISHACLL.
OrthoDBiEOG7R56S3.
TreeFamiTF336644.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
InterProiIPR013783. Ig-like_fold.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZQX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTALPPGPY PLPKPFRKAL YLCSQAELQP LRRDAMTFTC KALLCLGMTL
60 70 80 90 100
GLWITVLTEF LPRPILRVQP DTVVSTQSKV IFFCERSQGA ELYCLYKKGN
110 120 130 140 150
PRNPRCKEIR PKPGKKVEFF ISKIEPYHAG HYHCYYQIHG QWSEDSDALE
160 170 180 190 200
LVVTGVYDYN ELRLSVLPSP VVTVGRNMTL HCISHSHYDK FILTKEDHKF
210 220 230 240 250
TSSLDTQCIP PSGQCQALFV MGPMTSNHTG TFRCYGYYKH TPQLWSIPSE
260 270 280 290 300
PLEIHISGLS KKPSLLTHQG HILDPGVNLT LQCCSDINYD RFALYKVGGV
310 320 330 340 350
DIMQHTSQQT DTGFSMTNFT LGYVHHSTGG QYRCYGAHNL SSEWSASSDP
360 370 380 390 400
LDILITGPIQ MSTLPPITSM PPDQLESYVN ALIGVSVAFL VFLFILIFII
410 420 430 440 450
LQRRHQRKFR KDGEEAQKEK ELQYPTGAVE PISRDRDQQK RSNAAAATQE
460 470 480 490 500
ESVYASVEDM ETEDGVELDT WKPPEGDPQG ETYAQVKPSR LRRVEAIIPS
510 520 530 540 550
AMSREQLNTK YEQAEEGQEV DGQATESEEP QDVTYAQLCS RTLRQGTAAP
560 570 580
PLSQAGEAPE EPSVYAALAT ACPGAVPKDK EQ
Length:582
Mass (Da):65,137
Last modified:April 3, 2013 - v2
Checksum:i4B0FF9FCA4F5981A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06003248 Genomic DNA. No translation available.
CH474101 Genomic DNA. Translation: EDL84917.1.
RefSeqiNP_113901.2. NM_031713.1.
UniGeneiRn.207196.

Genome annotation databases

EnsembliENSRNOT00000015054; ENSRNOP00000015054; ENSRNOG00000011236.
GeneIDi65146.
KEGGirno:65146.
UCSCiRGD:70895. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06003248 Genomic DNA. No translation available.
CH474101 Genomic DNA. Translation: EDL84917.1.
RefSeqiNP_113901.2. NM_031713.1.
UniGeneiRn.207196.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000015054; ENSRNOP00000015054; ENSRNOG00000011236.
GeneIDi65146.
KEGGirno:65146.
UCSCiRGD:70895. rat.

Organism-specific databases

CTDi11025.
RGDi70895. Lilrb3.

Phylogenomic databases

GeneTreeiENSGT00760000119033.
OMAiISHACLL.
OrthoDBiEOG7R56S3.
TreeFamiTF336644.

Miscellaneous databases

NextBioi35569460.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
InterProiIPR013783. Ig-like_fold.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZQX2_RAT
AccessioniPrimary (citable) accession number: D3ZQX2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: April 29, 2015
This is version 41 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.