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Protein
Submitted name:

Oxoglutarate dehydrogenase-like

Gene

Ogdhl

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase-likeImported
Gene namesi
Name:OgdhlImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 16

Organism-specific databases

RGDi1310916 Ogdhl

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD3ZQD3
PeptideAtlasiD3ZQD3
PRIDEiD3ZQD3

Expressioni

Gene expression databases

BgeeiENSRNOG00000019955

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000027054

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini638 – 851Transket_pyrInterPro annotationAdd BLAST214

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili539 – 559Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0450 Eukaryota
COG0567 LUCA
GeneTreeiENSGT00530000063092
OMAiDDSDAYP
OrthoDBiEOG091G025G
TreeFamiTF300695

Family and domain databases

InterProiView protein in InterPro
IPR032106 2-oxogl_dehyd_N
IPR011603 2oxoglutarate_DH_E1
IPR001017 DH_E1
IPR031717 KGD_C
IPR029061 THDP-binding
IPR005475 Transketolase-like_Pyr-bd
PANTHERiPTHR23152 PTHR23152, 1 hit
PfamiView protein in Pfam
PF16078 2-oxogl_dehyd_N, 1 hit
PF00676 E1_dh, 1 hit
PF16870 OxoGdeHyase_C, 1 hit
PF02779 Transket_pyr, 1 hit
PIRSFiPIRSF000157 Oxoglu_dh_E1, 1 hit
SMARTiView protein in SMART
SM00861 Transket_pyr, 1 hit
SUPFAMiSSF52518 SSF52518, 2 hits
TIGRFAMsiTIGR00239 2oxo_dh_E1, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZQD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQLRLLLFR LGPQARKLLA TRDIAAFGGR RRSSGPPTTI PRSRGGVSPS
60 70 80 90 100
YVEEMYFAWL ENPQSVHKSW DNFFQRATKE ASVGPAQPQP PAVIQESRAS
110 120 130 140 150
VSSCTKTSKL VEDHLAVQSL IRAYQIRGHH VAQLDPLGIL DADLDSFVPS
160 170 180 190 200
DLITTIDKLA FYDLQEADLD KEFRLPTTTF IGGSENTLSL REIIRRLEST
210 220 230 240 250
YCQHIGLEFM FINDVEQCQW IRQKFETPGV MKFSIEEKRT LLARLVRSMR
260 270 280 290 300
FEDFLARKWS SEKRFGLEGC EVMIPALKTI IDKSSEMGVE NVILGMPHRG
310 320 330 340 350
RLNVLANVIR KDLEQIFCQF DPKLEAADEG SGDVKYHLGM YHERINRVTN
360 370 380 390 400
RNITLSLVAN PSHLEAVDPV VQGKTKAEQF YRGDAQGRKV MSILVHGDAA
410 420 430 440 450
FAGQGVVYET FHLSDLPSYT TNGTVHVVVN NQIGFTTDPR MARSSPYPTD
460 470 480 490 500
VARVVNAPIF HVNADDPEAV IYVCSVAAEW RNTFNKDVVV DLVCYRRRGH
510 520 530 540 550
NEMDEPMFTQ PLMYKQIHKQ VPVLKKYADK LIAEGTVTLQ EFEEEIAKYD
560 570 580 590 600
RICEEAYGRS KDKKILHIKH WLDSPWPGFF NVDGEPKSMT YPTTGIPEDT
610 620 630 640 650
LSHIGNVASS VPLEDFKIHT GLSRILRGRA DMTKKRTVDW ALAEYMAFGS
660 670 680 690 700
LLKEGIHVRL SGQDVERGTF SHRHHVLHDQ DVDRRTCVPM NHLWPDQAPY
710 720 730 740 750
TVCNSSLSEY GVLGFELGYA MASPNALVLW EAQFGDFHNT AQCIIDQFIS
760 770 780 790 800
TGQAKWVRHN GIVLLLPHGM EGMGPEHSSA RPERFLQMSN DDSDAYPVFT
810 820 830 840 850
EDFEVSQLYD CNWIVVNCST PASYFHVLRR QVLLPFRKPL IVFTPKSLLR
860 870 880 890 900
HPDAKSSFDQ MVSGTSFQRM IPEDGPAAQS PERVERLIFC TGKVYYDLVK
910 920 930 940 950
ERSSQGLEKQ VAITRLEQIS PFPFDLIMRE AEKYSGAELV WCQEEHKNMG
960 970 980 990 1000
YYDYISPRFM TLLGHSRPIW YVGREPAAAP ATGNKNTHLV SLRKFLDTAF
1010
NLKAFEGKTF
Length:1,010
Mass (Da):114,637
Last modified:July 22, 2015 - v2
Checksum:i358F47023F46C534
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07024604 Genomic DNA No translation available.
RefSeqiXP_006252646.1, XM_006252584.3
UniGeneiRn.38202

Genome annotation databases

EnsembliENSRNOT00000027054; ENSRNOP00000027054; ENSRNOG00000019955
GeneIDi290566
UCSCiRGD:1310916 rat

Similar proteinsi

Entry informationi

Entry nameiD3ZQD3_RAT
AccessioniPrimary (citable) accession number: D3ZQD3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: March 28, 2018
This is version 64 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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