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Protein
Submitted name:

Forkhead box protein D1

Gene

Foxd1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi130 – 224Fork-headPROSITE-ProRule annotationAdd BLAST95

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Forkhead box protein D1Imported
Gene namesi
Name:Foxd1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi621712 Foxd1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000043332
GenevisibleiD3ZP43 RN

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini130 – 224Fork-headInterPro annotationAdd BLAST95

Phylogenomic databases

eggNOGiKOG2294 Eukaryota
COG5025 LUCA
GeneTreeiENSGT00760000118904
KOiK09397
OMAiGYGPYGC
OrthoDBiEOG091G0HW9
TreeFamiTF316127

Family and domain databases

CDDicd00059 FH, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR001766 Fork_head_dom
IPR018122 TF_fork_head_CS_1
IPR030456 TF_fork_head_CS_2
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00250 Forkhead, 1 hit
PRINTSiPR00053 FORKHEAD
SMARTiView protein in SMART
SM00339 FH, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00657 FORK_HEAD_1, 1 hit
PS00658 FORK_HEAD_2, 1 hit
PS50039 FORK_HEAD_3, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZP43-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLSTEMSDA SGLAEETDID VVGEGEDEEE EEDDDDEGGG GSQLPSSAQR
60 70 80 90 100
RRRSYAGEDE LEDLEEEDDD EDLLLASRPA ASPAPPGPAP APGAGSGGCS
110 120 130 140 150
GAGAGGGAGG GVGAGAGTGG GGSSKNPLVK PPYSYIALIT MAILQSPKKR
160 170 180 190 200
LTLSEICEFI SGRFPYYREK FPAWQNSIRH NLSLNDCFVK IPREPGNPGK
210 220 230 240 250
GNYWTLDPES ADMFDNGSFL RRRKRFKRQP LLAPHAAAEA LLLRGAGPAA
260 270 280 290 300
SAGDPGAALF PPPPPPTACG YGAYGCAYGL QLPPCAPPSA LFAAAAAAAA
310 320 330 340 350
AAFHPHSPPP PPPPPPPPGA AAELARTAFG YRPHALAAAL PGPLQAAAVK
360 370 380 390 400
AGGPGTAALA RSPFSIESLI GRTRGPATAG AHASPGATSG TAPGPGGGGC
410 420 430 440 450
AVQAAAGPAV ALTRSLVVAA AAAASSVSSS AALGTLHQGT ALSSVENFTA

RISNC
Length:455
Mass (Da):45,360
Last modified:April 3, 2013 - v2
Checksum:i090706D656AEA15D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072696 Genomic DNA No translation available.
AC119356 Genomic DNA No translation available.
RefSeqiNP_599164.1, NM_134337.1
UniGeneiRn.50822

Genome annotation databases

EnsembliENSRNOT00000066819; ENSRNOP00000060730; ENSRNOG00000043332
GeneIDi171299
KEGGirno:171299

Similar proteinsi

Entry informationi

Entry nameiD3ZP43_RAT
AccessioniPrimary (citable) accession number: D3ZP43
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: March 28, 2018
This is version 67 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health