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D3ZNN0

- D3ZNN0_RAT

UniProt

D3ZNN0 - D3ZNN0_RAT

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Protein
Submitted name:

Protein Sbf1

Gene

Sbf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphatase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Sbf1Imported
Gene namesi
Name:Sbf1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 7

Organism-specific databases

RGDi1307090. Sbf1.

Expressioni

Gene expression databases

ExpressionAtlasiD3ZNN0. baseline and differential.

Family & Domainsi

Sequence similaritiesi

Contains 1 PH domain.UniRule annotation
Contains myotubularin phosphatase domain.SAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118819.
KOiK18061.
TreeFamiTF318583.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR005112. dDENN_dom.
IPR001194. DENN_dom.
IPR004182. GRAM.
IPR010569. Myotubularin-like_Pase_dom.
IPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR029021. Prot-tyrosine_phosphatase-like.
IPR022096. SBF2.
IPR005113. uDENN_dom.
[Graphical view]
PfamiPF03455. dDENN. 1 hit.
PF02141. DENN. 1 hit.
PF02893. GRAM. 1 hit.
PF06602. Myotub-related. 1 hit.
PF00169. PH. 1 hit.
PF12335. SBF2. 1 hit.
PF03456. uDENN. 1 hit.
[Graphical view]
SMARTiSM00801. dDENN. 1 hit.
SM00799. DENN. 1 hit.
SM00568. GRAM. 1 hit.
SM00233. PH. 1 hit.
SM00800. uDENN. 1 hit.
[Graphical view]
SUPFAMiSSF52799. SSF52799. 2 hits.
PROSITEiPS50947. DDENN. 1 hit.
PS50211. DENN. 1 hit.
PS50003. PH_DOMAIN. 1 hit.
PS51339. PPASE_MYOTUBULARIN. 1 hit.
PS50946. UDENN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZNN0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARLADYFVL VAFGPHPRGS GEGQGQILQR FPEKDWEDNP FPQGIELFCQ
60 70 80 90 100
PSGWQLCPER NPPTFFVAVL TDINSERHYC ACLTFWEPVE STQEVMCTED
110 120 130 140 150
ATEKEEEAHG GGQAQLSSTA PAQPGQLFAP KTLVLVSRLD HADVFRNSLG
160 170 180 190 200
LIYTIHVEGL NVNLENVIGN LLTCTVPLAG GSQRTISLGA GDRQVIQTPL
210 220 230 240 250
VDSLPVSRCS VALLFRQLGI TNVLSLFCAA LTEHKVLFLS RSYQRLADAC
260 270 280 290 300
RGLLALLFPL RYSFTYVPIL PAQLLEVLST PTPFIIGVNA AFQAETQELL
310 320 330 340 350
DVIVADLDGG TVTVPECVHI PPLPEPLQSQ THNVLSMVLD PELELADLAF
360 370 380 390 400
PPPTTSASSL KMQDKELRAV FLRLFAQLLQ GYRWCLHIVR IHPEPVIRFH
410 420 430 440 450
KAAFLGQRGL VEDDFLMKVL EGMAFAGFVS ERGVPYRSTD LFDELVAHEV
460 470 480 490 500
ARMRADENHP HRVLRHVQEL AEQLYKNENP YPAVAMHKVQ RPGEASHLRR
510 520 530 540 550
THRPFPRLDE GTVQWIVDQA AAKMQGAPPA VKAERRTTVP SGPPMTAILE
560 570 580 590 600
RCSGPHINSA RRLEVVRNCI SYVFEGKMLE AKKLLPAVLR ALKGRAARRC
610 620 630 640 650
LAHELHLHVQ QNRAVLDHQQ FDFVVRMMNC CLQDCTSLDE HGIAAALLPL
660 670 680 690 700
VTAFCRKLSP GVTQFAYSCV QEHVVWSTPQ FWEAMFYGDV QTHIRALYLE
710 720 730 740 750
PSDGVSPTQE TGEAQSQDDE RSALDVASEQ RRLWPTLSRE KQQELVQKEE
760 770 780 790 800
STVFSQAIHY ANRMSYLLLP LDSSKSRLLR ERAGLGDLES ASNSLVTNSM
810 820 830 840 850
AGSVAESYDT ESGFEDAETC DVAGAVVRFI NRFVDKVCTE SGVTSDHLKG
860 870 880 890 900
LHVMVPDIVQ MHIETLEAVH RESKRLPPIQ KPKLLRPRLL PGEECVLDGL
910 920 930 940 950
RVYLLPDGRE EGVGGSGGGP ALLPAEGAVF LTTYRVIFTG MPTDPLVGEQ
960 970 980 990 1000
VVVRSFPVAA LTKEKRISVQ TPVDQLLQDG LQLRSCTFQL LKMAFDEEVG
1010 1020 1030 1040 1050
SDSAELFRKQ LHKLRYPPDI RATFAFTLGS ALTPGRPPRV TKDKGPSFRT
1060 1070 1080 1090 1100
LSRNLVKNAK KTIGRQYVTR KKYNPPGWEH RGQPPPEDQE DEISVSEELE
1110 1120 1130 1140 1150
PSTLTPSSAL KPSDRMTMSS LVERACCRDY QRLGLGTLSS SLSRAKSEPF
1160 1170 1180 1190 1200
RISPVNRMYA ICRSYPGLLI VPQSIQDNAL QRVSRCYRQN RFPVVCWRSG
1210 1220 1230 1240 1250
RSKAVLLRSG GLHGKGVVGL FKAQNTPSPG QAQADSSSLE QEKYLQAVVS
1260 1270 1280 1290 1300
SMPRYADSSG RNTLSSFSSA HMGGHGKWSS VRASGRSSGL GADVGSRLAG
1310 1320 1330 1340 1350
RDLLSTPHTN GAPPDSGFLR PQRAALYIIG DKAQLKGVRP DPLQQWELVP
1360 1370 1380 1390 1400
IEVFEARQVK ASFKKLLKAC VPGCPATEPS PASFLRSLED SEWLIQIHKL
1410 1420 1430 1440 1450
LQISVLVVEL LDSGSSVLVS LEDGWDITTQ VVSLVQLLSD PFYRTLEGFR
1460 1470 1480 1490 1500
LLVEKEWLSF GHRFSHRGAH TLAGQSSGFT PVFLQFLDCV HQVHLQFPME
1510 1520 1530 1540 1550
FEFSQFYLKF LGYHHTSRRF RTFLLDSDYE RIELGLLYEE KGERRGQLAC
1560 1570 1580 1590 1600
KSVWEYVDRL SKRTPMFYNY TYAPEDTEVL RPYSNVSNLK VWDFYTEETL
1610 1620 1630 1640 1650
AEGPPYDWEL AQGPPEPPEE ERPDGGAPQS RRRVVWPCYD SRPRVQPDAI
1660 1670 1680 1690 1700
SRLLEELQRL ETELGRPSER WKETWDRVKA AQRLEGRQDG RGTPSSLLVS
1710 1720 1730 1740 1750
AVPHHRRSLG VYLQEGPVGS TLSLSLDSDQ SSGSTTSSSR QAARRSTSTL
1760 1770 1780 1790 1800
YSQFQTAESE NRSYEGTLYK KGAFMKPWKA RWFVLDKTKH QLRYYDHRVD
1810 1820 1830 1840 1850
TECKGVIDLA EVEAVAPGTP TIGAPKTVDE KAFFDVKTTR RVYNFCAQDV
1860
PSAQQWVDRI QSCLSDA
Length:1,867
Mass (Da):208,672
Last modified:April 3, 2013 - v2
Checksum:i83A20391901351E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06052361 Genomic DNA. No translation available.
RefSeqiXP_006242246.1. XM_006242184.2.
UniGeneiRn.7632.

Genome annotation databases

EnsembliENSRNOT00000041023; ENSRNOP00000046474; ENSRNOG00000008392.
GeneIDi300147.
KEGGirno:300147.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06052361 Genomic DNA. No translation available.
RefSeqi XP_006242246.1. XM_006242184.2.
UniGenei Rn.7632.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000041023 ; ENSRNOP00000046474 ; ENSRNOG00000008392 .
GeneIDi 300147.
KEGGi rno:300147.

Organism-specific databases

CTDi 6305.
RGDi 1307090. Sbf1.

Phylogenomic databases

GeneTreei ENSGT00760000118819.
KOi K18061.
TreeFami TF318583.

Miscellaneous databases

NextBioi 35568974.

Gene expression databases

ExpressionAtlasi D3ZNN0. baseline and differential.

Family and domain databases

Gene3Di 2.30.29.30. 1 hit.
InterProi IPR005112. dDENN_dom.
IPR001194. DENN_dom.
IPR004182. GRAM.
IPR010569. Myotubularin-like_Pase_dom.
IPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR029021. Prot-tyrosine_phosphatase-like.
IPR022096. SBF2.
IPR005113. uDENN_dom.
[Graphical view ]
Pfami PF03455. dDENN. 1 hit.
PF02141. DENN. 1 hit.
PF02893. GRAM. 1 hit.
PF06602. Myotub-related. 1 hit.
PF00169. PH. 1 hit.
PF12335. SBF2. 1 hit.
PF03456. uDENN. 1 hit.
[Graphical view ]
SMARTi SM00801. dDENN. 1 hit.
SM00799. DENN. 1 hit.
SM00568. GRAM. 1 hit.
SM00233. PH. 1 hit.
SM00800. uDENN. 1 hit.
[Graphical view ]
SUPFAMi SSF52799. SSF52799. 2 hits.
PROSITEi PS50947. DDENN. 1 hit.
PS50211. DENN. 1 hit.
PS50003. PH_DOMAIN. 1 hit.
PS51339. PPASE_MYOTUBULARIN. 1 hit.
PS50946. UDENN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZNN0_RAT
AccessioniPrimary (citable) accession number: D3ZNN0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: November 26, 2014
This is version 35 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3