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D3ZNN0

- D3ZNN0_RAT

UniProt

D3ZNN0 - D3ZNN0_RAT

Protein
Submitted name:

Protein Sbf1

Gene

Sbf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphatase activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Sbf1Imported
    Gene namesi
    Name:Sbf1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 7

    Organism-specific databases

    RGDi1307090. Sbf1.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 PH domain.UniRule annotation
    Contains myotubularin phosphatase domain.SAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00740000115188.
    KOiK18061.
    TreeFamiTF318583.

    Family and domain databases

    Gene3Di2.30.29.30. 1 hit.
    InterProiIPR005112. dDENN_dom.
    IPR001194. DENN_dom.
    IPR004182. GRAM.
    IPR010569. Myotubularin-like_Pase_dom.
    IPR001849. PH_domain.
    IPR011993. PH_like_dom.
    IPR029021. Prot-tyrosine_phosphatase-like.
    IPR022096. SBF2.
    IPR005113. uDENN_dom.
    [Graphical view]
    PfamiPF03455. dDENN. 1 hit.
    PF02141. DENN. 1 hit.
    PF02893. GRAM. 1 hit.
    PF06602. Myotub-related. 1 hit.
    PF00169. PH. 1 hit.
    PF12335. SBF2. 1 hit.
    PF03456. uDENN. 1 hit.
    [Graphical view]
    SMARTiSM00801. dDENN. 1 hit.
    SM00799. DENN. 1 hit.
    SM00568. GRAM. 1 hit.
    SM00233. PH. 1 hit.
    SM00800. uDENN. 1 hit.
    [Graphical view]
    SUPFAMiSSF52799. SSF52799. 2 hits.
    PROSITEiPS50947. DDENN. 1 hit.
    PS50211. DENN. 1 hit.
    PS50003. PH_DOMAIN. 1 hit.
    PS51339. PPASE_MYOTUBULARIN. 1 hit.
    PS50946. UDENN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZNN0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARLADYFVL VAFGPHPRGS GEGQGQILQR FPEKDWEDNP FPQGIELFCQ     50
    PSGWQLCPER NPPTFFVAVL TDINSERHYC ACLTFWEPVE STQEVMCTED 100
    ATEKEEEAHG GGQAQLSSTA PAQPGQLFAP KTLVLVSRLD HADVFRNSLG 150
    LIYTIHVEGL NVNLENVIGN LLTCTVPLAG GSQRTISLGA GDRQVIQTPL 200
    VDSLPVSRCS VALLFRQLGI TNVLSLFCAA LTEHKVLFLS RSYQRLADAC 250
    RGLLALLFPL RYSFTYVPIL PAQLLEVLST PTPFIIGVNA AFQAETQELL 300
    DVIVADLDGG TVTVPECVHI PPLPEPLQSQ THNVLSMVLD PELELADLAF 350
    PPPTTSASSL KMQDKELRAV FLRLFAQLLQ GYRWCLHIVR IHPEPVIRFH 400
    KAAFLGQRGL VEDDFLMKVL EGMAFAGFVS ERGVPYRSTD LFDELVAHEV 450
    ARMRADENHP HRVLRHVQEL AEQLYKNENP YPAVAMHKVQ RPGEASHLRR 500
    THRPFPRLDE GTVQWIVDQA AAKMQGAPPA VKAERRTTVP SGPPMTAILE 550
    RCSGPHINSA RRLEVVRNCI SYVFEGKMLE AKKLLPAVLR ALKGRAARRC 600
    LAHELHLHVQ QNRAVLDHQQ FDFVVRMMNC CLQDCTSLDE HGIAAALLPL 650
    VTAFCRKLSP GVTQFAYSCV QEHVVWSTPQ FWEAMFYGDV QTHIRALYLE 700
    PSDGVSPTQE TGEAQSQDDE RSALDVASEQ RRLWPTLSRE KQQELVQKEE 750
    STVFSQAIHY ANRMSYLLLP LDSSKSRLLR ERAGLGDLES ASNSLVTNSM 800
    AGSVAESYDT ESGFEDAETC DVAGAVVRFI NRFVDKVCTE SGVTSDHLKG 850
    LHVMVPDIVQ MHIETLEAVH RESKRLPPIQ KPKLLRPRLL PGEECVLDGL 900
    RVYLLPDGRE EGVGGSGGGP ALLPAEGAVF LTTYRVIFTG MPTDPLVGEQ 950
    VVVRSFPVAA LTKEKRISVQ TPVDQLLQDG LQLRSCTFQL LKMAFDEEVG 1000
    SDSAELFRKQ LHKLRYPPDI RATFAFTLGS ALTPGRPPRV TKDKGPSFRT 1050
    LSRNLVKNAK KTIGRQYVTR KKYNPPGWEH RGQPPPEDQE DEISVSEELE 1100
    PSTLTPSSAL KPSDRMTMSS LVERACCRDY QRLGLGTLSS SLSRAKSEPF 1150
    RISPVNRMYA ICRSYPGLLI VPQSIQDNAL QRVSRCYRQN RFPVVCWRSG 1200
    RSKAVLLRSG GLHGKGVVGL FKAQNTPSPG QAQADSSSLE QEKYLQAVVS 1250
    SMPRYADSSG RNTLSSFSSA HMGGHGKWSS VRASGRSSGL GADVGSRLAG 1300
    RDLLSTPHTN GAPPDSGFLR PQRAALYIIG DKAQLKGVRP DPLQQWELVP 1350
    IEVFEARQVK ASFKKLLKAC VPGCPATEPS PASFLRSLED SEWLIQIHKL 1400
    LQISVLVVEL LDSGSSVLVS LEDGWDITTQ VVSLVQLLSD PFYRTLEGFR 1450
    LLVEKEWLSF GHRFSHRGAH TLAGQSSGFT PVFLQFLDCV HQVHLQFPME 1500
    FEFSQFYLKF LGYHHTSRRF RTFLLDSDYE RIELGLLYEE KGERRGQLAC 1550
    KSVWEYVDRL SKRTPMFYNY TYAPEDTEVL RPYSNVSNLK VWDFYTEETL 1600
    AEGPPYDWEL AQGPPEPPEE ERPDGGAPQS RRRVVWPCYD SRPRVQPDAI 1650
    SRLLEELQRL ETELGRPSER WKETWDRVKA AQRLEGRQDG RGTPSSLLVS 1700
    AVPHHRRSLG VYLQEGPVGS TLSLSLDSDQ SSGSTTSSSR QAARRSTSTL 1750
    YSQFQTAESE NRSYEGTLYK KGAFMKPWKA RWFVLDKTKH QLRYYDHRVD 1800
    TECKGVIDLA EVEAVAPGTP TIGAPKTVDE KAFFDVKTTR RVYNFCAQDV 1850
    PSAQQWVDRI QSCLSDA 1867
    Length:1,867
    Mass (Da):208,672
    Last modified:April 3, 2013 - v2
    Checksum:i83A20391901351E1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06052361 Genomic DNA. No translation available.
    RefSeqiXP_006242246.1. XM_006242184.1.
    UniGeneiRn.7632.

    Genome annotation databases

    EnsembliENSRNOT00000041023; ENSRNOP00000046474; ENSRNOG00000008392.
    GeneIDi300147.
    KEGGirno:300147.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06052361 Genomic DNA. No translation available.
    RefSeqi XP_006242246.1. XM_006242184.1.
    UniGenei Rn.7632.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000041023 ; ENSRNOP00000046474 ; ENSRNOG00000008392 .
    GeneIDi 300147.
    KEGGi rno:300147.

    Organism-specific databases

    CTDi 6305.
    RGDi 1307090. Sbf1.

    Phylogenomic databases

    GeneTreei ENSGT00740000115188.
    KOi K18061.
    TreeFami TF318583.

    Miscellaneous databases

    NextBioi 35568974.

    Family and domain databases

    Gene3Di 2.30.29.30. 1 hit.
    InterProi IPR005112. dDENN_dom.
    IPR001194. DENN_dom.
    IPR004182. GRAM.
    IPR010569. Myotubularin-like_Pase_dom.
    IPR001849. PH_domain.
    IPR011993. PH_like_dom.
    IPR029021. Prot-tyrosine_phosphatase-like.
    IPR022096. SBF2.
    IPR005113. uDENN_dom.
    [Graphical view ]
    Pfami PF03455. dDENN. 1 hit.
    PF02141. DENN. 1 hit.
    PF02893. GRAM. 1 hit.
    PF06602. Myotub-related. 1 hit.
    PF00169. PH. 1 hit.
    PF12335. SBF2. 1 hit.
    PF03456. uDENN. 1 hit.
    [Graphical view ]
    SMARTi SM00801. dDENN. 1 hit.
    SM00799. DENN. 1 hit.
    SM00568. GRAM. 1 hit.
    SM00233. PH. 1 hit.
    SM00800. uDENN. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52799. SSF52799. 2 hits.
    PROSITEi PS50947. DDENN. 1 hit.
    PS50211. DENN. 1 hit.
    PS50003. PH_DOMAIN. 1 hit.
    PS51339. PPASE_MYOTUBULARIN. 1 hit.
    PS50946. UDENN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZNN0_RAT
    AccessioniPrimary (citable) accession number: D3ZNN0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 33 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3