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D3ZNG0

- D3ZNG0_RAT

UniProt

D3ZNG0 - D3ZNG0_RAT

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Protein
Submitted name: Latrophilin-2
Gene
Lphn2
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: UniProtKB-KW
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. neuropeptide signaling pathway Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorSAAS annotations, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
Latrophilin-2Imported
Gene namesi
Name:Lphn2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 2

Organism-specific databases

RGDi620835. Lphn2.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotations, Membrane

Structurei

3D structure databases

ProteinModelPortaliD3ZNG0.

Family & Domainsi

Sequence similaritiesi

Contains 1 SUEL-type lectin domain.UniRule annotation
Contains GPS domain.SAAS annotations
Contains olfactomedin-like domain.SAAS annotations

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00710000106375.

Family and domain databases

InterProiIPR022624. DUF3497.
IPR017981. GPCR_2-like.
IPR001879. GPCR_2_extracellular_dom.
IPR003924. GPCR_2_latrophilin.
IPR003334. GPCR_2_latrophilin_rcpt_C.
IPR000832. GPCR_2_secretin-like.
IPR017983. GPCR_2_secretin-like_CS.
IPR000203. GPS.
IPR000922. Lectin_gal-bd_dom.
IPR003112. Olfac-like.
[Graphical view]
PfamiPF00002. 7tm_2. 1 hit.
PF12003. DUF3497. 1 hit.
PF02140. Gal_Lectin. 1 hit.
PF01825. GPS. 1 hit.
PF02793. HRM. 1 hit.
PF02354. Latrophilin. 2 hits.
PF02191. OLF. 1 hit.
[Graphical view]
PRINTSiPR00249. GPCRSECRETIN.
PR01444. LATROPHILIN.
SMARTiSM00303. GPS. 1 hit.
SM00008. HormR. 1 hit.
SM00284. OLF. 1 hit.
[Graphical view]
PROSITEiPS00650. G_PROTEIN_RECEP_F2_2. 1 hit.
PS50227. G_PROTEIN_RECEP_F2_3. 1 hit.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
PS51132. OLF. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZNG0-1 [UniParc]FASTAAdd to Basket

« Hide

MVSSGCRMRS LWFIMIISFS PNTEGFSRAA LPFGLVRREL SCEGYSIDLR     50
CPGSDVIMIE SANYGRTDDK ICDADPFQME NTDCYLPDAF KIMTQRCNNR 100
TQCVVVTGSD VFPDPCPGTY KYLEVQYECV PYTLENKVFV CPGTLKAIVD 150
SPSIYEAEQK AGAWCKDPLQ AADKIYFMPW TPYRTDTLIE YASLEDFQNS 200
RQTTTYKLPN RVDGTGFVVY DGAVFFNKER TRNIVKFDLR TRIKSGEAII 250
NYANYHDTSP YRWGGKTDID LAVDENGLWV IYATEQNNGM IVISQLNPYT 300
LRFEATWETT YDKRAASNAF MICGVLYVVR SVYQDNESEA GKNVIDYIYN 350
TRLSRGEHVD VPFPNQYQYI AAVDYNPRDN QLYVWNNNFI LRYSLEFGPP 400
DPAQVPTTAV TITSSAELFK TTVSTTSSTS QRGPVSSTVA GPQEGSRGTK 450
PPPAVSTTKI PPVTNIFPLP ERFCEALEMK GIKWPQTQRG MMVERPCPKG 500
TRGTASYLCM ASTGTWNPKG PDLSNCTSHW VNQLAQKIRS GENAASLANE 550
LAKHTKGTVF AGDVSSSVRL MEQLVDILDA QLQELKPSEK DSAGRSYNKL 600
QKREKTCRAY LKAIVDTVDN LLRAETLDCW KHMNSSEQAH TATMLLDTLE 650
EGAFVLADNL LEPTRVSMPT DNIVLEVAVL STEGQVQDFT FHLGFKGAFS 700
SIQLSANTVK QNSRNGLAKV VFIIYRSLGP FLSTENATVK LGADLLGRNS 750
TIAVNSHVLS VSINKESSRV YLTDPVLFSM PHIDSDNYFN ANCSFWNYSE 800
RTMMGYWSTQ GCKLVDTNKT RTTCACSHLT NFAILMAHRE IVYKDGVHKL 850
LLTVITWVGI VVSLVCLAIC IFTFCFFRGL QSDRNTIHKN LCINLFIAEF 900
IFLIGIDKTQ YTIACPVFAG LLHFFFLAAF SWMCLEGVQL YLMLVEVFES 950
EYSRKKYYYV AGYLFPATVV GVSAAIDYKS YGTLEACWLH VDNYFIWSFI 1000
GPVTFIILLN IIFLVITLCK MVKHSNTLKP DSSRLENINN YRVCDGYYNT 1050
DLPGSWVLGA FALLCLLGLT WSFGLLFVNE ETVVMAYLFT AFNAFQGLFI 1100
FIFHCALQKK VRKEYAKCFR HWYCCGGLPT ESPHSSVKAS TSRTSARYSS 1150
GTQSRIRRMW NDTVRKQSES SFISGDINST STLNQGHSLN NTRDTSAMDT 1200
LPLNGNFNNS YSLRKADYHD GVQVVDCGLS LNDTAFEKMI ISELVHNNLR 1250
GSNKTHNLEL KLPVKPVIGG SSSEDDAIVA DASSLMHGDN PGLEFRHKEL 1300
EAPLIPQRTH SLLYQPQKKV KPEATDSYVS QLTAEADEHL QSPNRDSLYT 1350
SMPNLRDSPY PESSPDMAED LSPSRRSENE DIYYKSMPNL GAGRQLQMCY 1400
QISRGNSDGY IIPINKEGCI PEGDVREGQM QLVTSL 1436
Length:1,436
Mass (Da):161,186
Last modified:April 3, 2013 - v2
Checksum:i8739CE461785E870
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06021536 Genomic DNA. No translation available.
AABR06021537 Genomic DNA. No translation available.
AABR06021538 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000045020; ENSRNOP00000041829; ENSRNOG00000032660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06021536 Genomic DNA. No translation available.
AABR06021537 Genomic DNA. No translation available.
AABR06021538 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali D3ZNG0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000045020 ; ENSRNOP00000041829 ; ENSRNOG00000032660 .

Organism-specific databases

RGDi 620835. Lphn2.

Phylogenomic databases

GeneTreei ENSGT00710000106375.

Miscellaneous databases

NextBioi 35568928.

Family and domain databases

InterProi IPR022624. DUF3497.
IPR017981. GPCR_2-like.
IPR001879. GPCR_2_extracellular_dom.
IPR003924. GPCR_2_latrophilin.
IPR003334. GPCR_2_latrophilin_rcpt_C.
IPR000832. GPCR_2_secretin-like.
IPR017983. GPCR_2_secretin-like_CS.
IPR000203. GPS.
IPR000922. Lectin_gal-bd_dom.
IPR003112. Olfac-like.
[Graphical view ]
Pfami PF00002. 7tm_2. 1 hit.
PF12003. DUF3497. 1 hit.
PF02140. Gal_Lectin. 1 hit.
PF01825. GPS. 1 hit.
PF02793. HRM. 1 hit.
PF02354. Latrophilin. 2 hits.
PF02191. OLF. 1 hit.
[Graphical view ]
PRINTSi PR00249. GPCRSECRETIN.
PR01444. LATROPHILIN.
SMARTi SM00303. GPS. 1 hit.
SM00008. HormR. 1 hit.
SM00284. OLF. 1 hit.
[Graphical view ]
PROSITEi PS00650. G_PROTEIN_RECEP_F2_2. 1 hit.
PS50227. G_PROTEIN_RECEP_F2_3. 1 hit.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
PS51132. OLF. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZNG0_RAT
AccessioniPrimary (citable) accession number: D3ZNG0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: February 19, 2014
This is version 34 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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