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D3ZNG0

- D3ZNG0_RAT

UniProt

D3ZNG0 - D3ZNG0_RAT

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Protein
Submitted name:

Latrophilin-2

Gene

Lphn2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. carbohydrate binding Source: InterPro
  2. G-protein coupled receptor activity Source: UniProtKB-KW

GO - Biological processi

  1. neuropeptide signaling pathway Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorSAAS annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
Latrophilin-2Imported
Gene namesi
Name:Lphn2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 2

Organism-specific databases

RGDi620835. Lphn2.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Expressioni

Gene expression databases

ExpressionAtlasiD3ZNG0. baseline.

Structurei

3D structure databases

ProteinModelPortaliD3ZNG0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 SUEL-type lectin domain.UniRule annotation
Contains GPS domain.SAAS annotation
Contains olfactomedin-like domain.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118787.

Family and domain databases

InterProiIPR022624. DUF3497.
IPR017981. GPCR_2-like.
IPR001879. GPCR_2_extracellular_dom.
IPR003924. GPCR_2_latrophilin.
IPR003334. GPCR_2_latrophilin_rcpt_C.
IPR000832. GPCR_2_secretin-like.
IPR017983. GPCR_2_secretin-like_CS.
IPR000203. GPS.
IPR000922. Lectin_gal-bd_dom.
IPR003112. Olfac-like.
[Graphical view]
PfamiPF00002. 7tm_2. 1 hit.
PF12003. DUF3497. 1 hit.
PF02140. Gal_Lectin. 1 hit.
PF01825. GPS. 1 hit.
PF02793. HRM. 1 hit.
PF02354. Latrophilin. 2 hits.
PF02191. OLF. 1 hit.
[Graphical view]
PRINTSiPR00249. GPCRSECRETIN.
PR01444. LATROPHILIN.
SMARTiSM00303. GPS. 1 hit.
SM00008. HormR. 1 hit.
SM00284. OLF. 1 hit.
[Graphical view]
PROSITEiPS00650. G_PROTEIN_RECEP_F2_2. 1 hit.
PS50227. G_PROTEIN_RECEP_F2_3. 1 hit.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
PS51132. OLF. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZNG0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVSSGCRMRS LWFIMIISFS PNTEGFSRAA LPFGLVRREL SCEGYSIDLR
60 70 80 90 100
CPGSDVIMIE SANYGRTDDK ICDADPFQME NTDCYLPDAF KIMTQRCNNR
110 120 130 140 150
TQCVVVTGSD VFPDPCPGTY KYLEVQYECV PYTLENKVFV CPGTLKAIVD
160 170 180 190 200
SPSIYEAEQK AGAWCKDPLQ AADKIYFMPW TPYRTDTLIE YASLEDFQNS
210 220 230 240 250
RQTTTYKLPN RVDGTGFVVY DGAVFFNKER TRNIVKFDLR TRIKSGEAII
260 270 280 290 300
NYANYHDTSP YRWGGKTDID LAVDENGLWV IYATEQNNGM IVISQLNPYT
310 320 330 340 350
LRFEATWETT YDKRAASNAF MICGVLYVVR SVYQDNESEA GKNVIDYIYN
360 370 380 390 400
TRLSRGEHVD VPFPNQYQYI AAVDYNPRDN QLYVWNNNFI LRYSLEFGPP
410 420 430 440 450
DPAQVPTTAV TITSSAELFK TTVSTTSSTS QRGPVSSTVA GPQEGSRGTK
460 470 480 490 500
PPPAVSTTKI PPVTNIFPLP ERFCEALEMK GIKWPQTQRG MMVERPCPKG
510 520 530 540 550
TRGTASYLCM ASTGTWNPKG PDLSNCTSHW VNQLAQKIRS GENAASLANE
560 570 580 590 600
LAKHTKGTVF AGDVSSSVRL MEQLVDILDA QLQELKPSEK DSAGRSYNKL
610 620 630 640 650
QKREKTCRAY LKAIVDTVDN LLRAETLDCW KHMNSSEQAH TATMLLDTLE
660 670 680 690 700
EGAFVLADNL LEPTRVSMPT DNIVLEVAVL STEGQVQDFT FHLGFKGAFS
710 720 730 740 750
SIQLSANTVK QNSRNGLAKV VFIIYRSLGP FLSTENATVK LGADLLGRNS
760 770 780 790 800
TIAVNSHVLS VSINKESSRV YLTDPVLFSM PHIDSDNYFN ANCSFWNYSE
810 820 830 840 850
RTMMGYWSTQ GCKLVDTNKT RTTCACSHLT NFAILMAHRE IVYKDGVHKL
860 870 880 890 900
LLTVITWVGI VVSLVCLAIC IFTFCFFRGL QSDRNTIHKN LCINLFIAEF
910 920 930 940 950
IFLIGIDKTQ YTIACPVFAG LLHFFFLAAF SWMCLEGVQL YLMLVEVFES
960 970 980 990 1000
EYSRKKYYYV AGYLFPATVV GVSAAIDYKS YGTLEACWLH VDNYFIWSFI
1010 1020 1030 1040 1050
GPVTFIILLN IIFLVITLCK MVKHSNTLKP DSSRLENINN YRVCDGYYNT
1060 1070 1080 1090 1100
DLPGSWVLGA FALLCLLGLT WSFGLLFVNE ETVVMAYLFT AFNAFQGLFI
1110 1120 1130 1140 1150
FIFHCALQKK VRKEYAKCFR HWYCCGGLPT ESPHSSVKAS TSRTSARYSS
1160 1170 1180 1190 1200
GTQSRIRRMW NDTVRKQSES SFISGDINST STLNQGHSLN NTRDTSAMDT
1210 1220 1230 1240 1250
LPLNGNFNNS YSLRKADYHD GVQVVDCGLS LNDTAFEKMI ISELVHNNLR
1260 1270 1280 1290 1300
GSNKTHNLEL KLPVKPVIGG SSSEDDAIVA DASSLMHGDN PGLEFRHKEL
1310 1320 1330 1340 1350
EAPLIPQRTH SLLYQPQKKV KPEATDSYVS QLTAEADEHL QSPNRDSLYT
1360 1370 1380 1390 1400
SMPNLRDSPY PESSPDMAED LSPSRRSENE DIYYKSMPNL GAGRQLQMCY
1410 1420 1430
QISRGNSDGY IIPINKEGCI PEGDVREGQM QLVTSL
Length:1,436
Mass (Da):161,186
Last modified:April 3, 2013 - v2
Checksum:i8739CE461785E870
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06021536 Genomic DNA. No translation available.
AABR06021537 Genomic DNA. No translation available.
AABR06021538 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000045020; ENSRNOP00000041829; ENSRNOG00000032660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06021536 Genomic DNA. No translation available.
AABR06021537 Genomic DNA. No translation available.
AABR06021538 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali D3ZNG0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000045020 ; ENSRNOP00000041829 ; ENSRNOG00000032660 .

Organism-specific databases

RGDi 620835. Lphn2.

Phylogenomic databases

GeneTreei ENSGT00760000118787.

Miscellaneous databases

NextBioi 35568928.

Gene expression databases

ExpressionAtlasi D3ZNG0. baseline.

Family and domain databases

InterProi IPR022624. DUF3497.
IPR017981. GPCR_2-like.
IPR001879. GPCR_2_extracellular_dom.
IPR003924. GPCR_2_latrophilin.
IPR003334. GPCR_2_latrophilin_rcpt_C.
IPR000832. GPCR_2_secretin-like.
IPR017983. GPCR_2_secretin-like_CS.
IPR000203. GPS.
IPR000922. Lectin_gal-bd_dom.
IPR003112. Olfac-like.
[Graphical view ]
Pfami PF00002. 7tm_2. 1 hit.
PF12003. DUF3497. 1 hit.
PF02140. Gal_Lectin. 1 hit.
PF01825. GPS. 1 hit.
PF02793. HRM. 1 hit.
PF02354. Latrophilin. 2 hits.
PF02191. OLF. 1 hit.
[Graphical view ]
PRINTSi PR00249. GPCRSECRETIN.
PR01444. LATROPHILIN.
SMARTi SM00303. GPS. 1 hit.
SM00008. HormR. 1 hit.
SM00284. OLF. 1 hit.
[Graphical view ]
PROSITEi PS00650. G_PROTEIN_RECEP_F2_2. 1 hit.
PS50227. G_PROTEIN_RECEP_F2_3. 1 hit.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
PS51132. OLF. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZNG0_RAT
AccessioniPrimary (citable) accession number: D3ZNG0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: November 26, 2014
This is version 37 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3