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D3ZLC3

- D3ZLC3_RAT

UniProt

D3ZLC3 - D3ZLC3_RAT

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Protein
Submitted name:

Protein Ssfa2

Gene

Ssfa2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Ssfa2Imported
Submitted name:
Sperm specific antigen 2 (Predicted)Imported
Gene namesi
Name:Ssfa2Imported
Synonyms:Ssfa2_predictedImported
ORF Names:rCG_27156Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 3

Organism-specific databases

RGDi1310767. Ssfa2.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. nucleus Source: Ensembl
  3. plasma membrane Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063345.
OMAiQSTCSLH.
OrthoDBiEOG7S21X2.
TreeFamiTF331566.

Family and domain databases

InterProiIPR029325. IP3R-bd.
IPR026648. SSFA2.
IPR029326. SSFA2_C.
[Graphical view]
PANTHERiPTHR17469:SF11. PTHR17469:SF11. 1 hit.
PfamiPF14722. KRAP_IP3R_bind. 1 hit.
PF14723. SSFA2_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZLC3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRPLSAEAE EELEWQVASR RRKAWAKCRS SWQASETEDL STETTTQDED
60 70 80 90 100
EDDEEDLPGA KLPAAAGRGN VPNEKIAIWL KDCRTPLGAS LDEQSSVGPK
110 120 130 140 150
GVLLRNGGSF EDDLSLGAEA NHLHEPDAQV ENCNNILAKE RRLQFHQKGR
160 170 180 190 200
SMNSTGSGKS SGTVSSVSEL LELYEEDPEE ILYNLGFGRD EPDIASKIPS
210 220 230 240 250
RFFNSSSFAR GIDIKVFLSA QMQRMEVENP NYALTSRFRQ IEVLTTVANA
260 270 280 290 300
FSSLYSQVSG TPLQRIGSMS SVTSTKEAAD CPPPLTRSNT ANRLMKTLSK
310 320 330 340 350
LNLCVDKTEK AEGSSTPAAE KGRSLSVSLS EDGGGGKSDP KPQKVIKKKE
360 370 380 390 400
SSSMLATVTE EVSGSSSTIT DSIDADRLSD EAESNISHKV ESEENGEAHS
410 420 430 440 450
QNDALRQSAV TDPDFGHDGG SMSSLCELES SSELKSAQAS SSEKEPCATL
460 470 480 490 500
TIPSIRNIMV QQKDSFEMEE VQSTEGEAPH VPATCQLSLA KSKRDHLLRT
510 520 530 540 550
ASQHSDSSGF AEDSTDCLSL NHLQVHESLQ AMGSSADSCD SETTVTSLGE
560 570 580 590 600
DHVTPTAPDQ PYFNESEEES LASLQKGRAK VIVAEKRKAD NQDFPHCATA
610 620 630 640 650
ENAGNNESVK GPCEPGPQIT ETETEEEPPL AATGELLREG SGESDMDKGS
660 670 680 690 700
ECEFAQYTTH HILRSLTSFE EAQGSGMSSK KKTEFPSSVD RVNTALQRAQ
710 720 730 740 750
MKVCSMSGQR VGRSLIKSKD LLKQRYFLAK AGYPLRRSQS LPTTLLSPVR
760 770 780 790 800
VVSSVNVRLS PGKETRCSPP SFTYKYTPEE EQELEKQVTE HDGQSLVKST
810 820 830 840 850
IFIPPSSVKK EEAPQSEGTR LEECHHGRLA PCPQFAPISQ STCSLHSVHS
860 870 880 890 900
EWQDRPLCEH MRTLSAHSVP NISGAACSAF SSPFGCPYSH RHAAHPCRPC
910 920 930 940 950
PVNPPSAIEM QLRRVLHDIR NSLQNLSQYP MTRGPDLAAA PYSTQKSSVL
960 970 980 990 1000
PLYENTFQEL QVVRRSLNLF RTQMMDLELA MLRQQTVVYP HMTEEDRYEV
1010 1020 1030 1040 1050
DQLQGLRNSV RMELQDLELQ LEERLLGLDE QLRAVRVPSP FRSSALPGMC
1060 1070 1080 1090 1100
GSRSADNLSC PSPLNVMEPV TELMREQSYL KSELGLSLGD MGYEIPPGES
1110 1120 1130 1140 1150
SESVFSQATS ESSSVCSSPS HTNRRSRGPS GSKPRARLVA RKKIFRASVA
1160 1170 1180 1190 1200
LTPTAPSRTG SVQTPPDLES SEEAGAAEEA SQVVGLTSHV EEEPEDLSLM
1210 1220 1230 1240 1250
PTAEEMHRNV EQDELQQVIR EIKESIVGEI RREIVSGLLA AVSSSKASAS

KQDSH
Length:1,255
Mass (Da):137,191
Last modified:April 20, 2010 - v1
Checksum:i03409140A92B915B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06024309 Genomic DNA. No translation available.
CH473949 Genomic DNA. Translation: EDL79267.1.
RefSeqiNP_001101208.1. NM_001107738.1.
UniGeneiRn.12870.

Genome annotation databases

EnsembliENSRNOT00000008046; ENSRNOP00000008046; ENSRNOG00000005865.
GeneIDi311146.
KEGGirno:311146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06024309 Genomic DNA. No translation available.
CH473949 Genomic DNA. Translation: EDL79267.1 .
RefSeqi NP_001101208.1. NM_001107738.1.
UniGenei Rn.12870.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000008046 ; ENSRNOP00000008046 ; ENSRNOG00000005865 .
GeneIDi 311146.
KEGGi rno:311146.

Organism-specific databases

CTDi 6744.
RGDi 1310767. Ssfa2.

Phylogenomic databases

GeneTreei ENSGT00530000063345.
OMAi QSTCSLH.
OrthoDBi EOG7S21X2.
TreeFami TF331566.

Miscellaneous databases

NextBioi 663062.
PROi D3ZLC3.

Family and domain databases

InterProi IPR029325. IP3R-bd.
IPR026648. SSFA2.
IPR029326. SSFA2_C.
[Graphical view ]
PANTHERi PTHR17469:SF11. PTHR17469:SF11. 1 hit.
Pfami PF14722. KRAP_IP3R_bind. 1 hit.
PF14723. SSFA2_C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZLC3_RAT
AccessioniPrimary (citable) accession number: D3ZLC3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3