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D3ZLC3

- D3ZLC3_RAT

UniProt

D3ZLC3 - D3ZLC3_RAT

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Protein
Submitted name: Protein Ssfa2
Gene
Ssfa2, Ssfa2_predicted, rCG_27156
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Ssfa2Imported
Submitted name:
Sperm specific antigen 2 (Predicted)Imported
Gene namesi
Name:Ssfa2Imported
Synonyms:Ssfa2_predictedImported
ORF Names:rCG_27156Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 3

Organism-specific databases

RGDi1310767. Ssfa2.

Subcellular locationi

GO - Cellular componenti

  1. plasma membrane Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063345.
OMAiQSTCSLH.
OrthoDBiEOG7S21X2.
TreeFamiTF331566.

Family and domain databases

InterProiIPR029325. IP3R-bd.
IPR026648. SSFA2.
IPR029326. SSFA2_C.
[Graphical view]
PANTHERiPTHR17469:SF11. PTHR17469:SF11. 1 hit.
PfamiPF14722. KRAP_IP3R_bind. 1 hit.
PF14723. SSFA2_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZLC3-1 [UniParc]FASTAAdd to Basket

« Hide

MNRPLSAEAE EELEWQVASR RRKAWAKCRS SWQASETEDL STETTTQDED     50
EDDEEDLPGA KLPAAAGRGN VPNEKIAIWL KDCRTPLGAS LDEQSSVGPK 100
GVLLRNGGSF EDDLSLGAEA NHLHEPDAQV ENCNNILAKE RRLQFHQKGR 150
SMNSTGSGKS SGTVSSVSEL LELYEEDPEE ILYNLGFGRD EPDIASKIPS 200
RFFNSSSFAR GIDIKVFLSA QMQRMEVENP NYALTSRFRQ IEVLTTVANA 250
FSSLYSQVSG TPLQRIGSMS SVTSTKEAAD CPPPLTRSNT ANRLMKTLSK 300
LNLCVDKTEK AEGSSTPAAE KGRSLSVSLS EDGGGGKSDP KPQKVIKKKE 350
SSSMLATVTE EVSGSSSTIT DSIDADRLSD EAESNISHKV ESEENGEAHS 400
QNDALRQSAV TDPDFGHDGG SMSSLCELES SSELKSAQAS SSEKEPCATL 450
TIPSIRNIMV QQKDSFEMEE VQSTEGEAPH VPATCQLSLA KSKRDHLLRT 500
ASQHSDSSGF AEDSTDCLSL NHLQVHESLQ AMGSSADSCD SETTVTSLGE 550
DHVTPTAPDQ PYFNESEEES LASLQKGRAK VIVAEKRKAD NQDFPHCATA 600
ENAGNNESVK GPCEPGPQIT ETETEEEPPL AATGELLREG SGESDMDKGS 650
ECEFAQYTTH HILRSLTSFE EAQGSGMSSK KKTEFPSSVD RVNTALQRAQ 700
MKVCSMSGQR VGRSLIKSKD LLKQRYFLAK AGYPLRRSQS LPTTLLSPVR 750
VVSSVNVRLS PGKETRCSPP SFTYKYTPEE EQELEKQVTE HDGQSLVKST 800
IFIPPSSVKK EEAPQSEGTR LEECHHGRLA PCPQFAPISQ STCSLHSVHS 850
EWQDRPLCEH MRTLSAHSVP NISGAACSAF SSPFGCPYSH RHAAHPCRPC 900
PVNPPSAIEM QLRRVLHDIR NSLQNLSQYP MTRGPDLAAA PYSTQKSSVL 950
PLYENTFQEL QVVRRSLNLF RTQMMDLELA MLRQQTVVYP HMTEEDRYEV 1000
DQLQGLRNSV RMELQDLELQ LEERLLGLDE QLRAVRVPSP FRSSALPGMC 1050
GSRSADNLSC PSPLNVMEPV TELMREQSYL KSELGLSLGD MGYEIPPGES 1100
SESVFSQATS ESSSVCSSPS HTNRRSRGPS GSKPRARLVA RKKIFRASVA 1150
LTPTAPSRTG SVQTPPDLES SEEAGAAEEA SQVVGLTSHV EEEPEDLSLM 1200
PTAEEMHRNV EQDELQQVIR EIKESIVGEI RREIVSGLLA AVSSSKASAS 1250
KQDSH 1255
Length:1,255
Mass (Da):137,191
Last modified:April 20, 2010 - v1
Checksum:i03409140A92B915B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06024309 Genomic DNA. No translation available.
CH473949 Genomic DNA. Translation: EDL79267.1.
RefSeqiNP_001101208.1. NM_001107738.1.
UniGeneiRn.12870.

Genome annotation databases

EnsembliENSRNOT00000008046; ENSRNOP00000008046; ENSRNOG00000005865.
GeneIDi311146.
KEGGirno:311146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06024309 Genomic DNA. No translation available.
CH473949 Genomic DNA. Translation: EDL79267.1 .
RefSeqi NP_001101208.1. NM_001107738.1.
UniGenei Rn.12870.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000008046 ; ENSRNOP00000008046 ; ENSRNOG00000005865 .
GeneIDi 311146.
KEGGi rno:311146.

Organism-specific databases

CTDi 6744.
RGDi 1310767. Ssfa2.

Phylogenomic databases

GeneTreei ENSGT00530000063345.
OMAi QSTCSLH.
OrthoDBi EOG7S21X2.
TreeFami TF331566.

Miscellaneous databases

NextBioi 663062.
PROi D3ZLC3.

Family and domain databases

InterProi IPR029325. IP3R-bd.
IPR026648. SSFA2.
IPR029326. SSFA2_C.
[Graphical view ]
PANTHERi PTHR17469:SF11. PTHR17469:SF11. 1 hit.
Pfami PF14722. KRAP_IP3R_bind. 1 hit.
PF14723. SSFA2_C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZLC3_RAT
AccessioniPrimary (citable) accession number: D3ZLC3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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