D3ZLC3 (D3ZLC3_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Ssfa2 Ensembl ENSRNOP00000008046

Submitted name:
Sperm specific antigen 2 (Predicted) EMBL EDL79267.1

Gene names

Name:	Ssfa2 Ensembl ENSRNOP00000008046
Synonyms:	Ssfa2_predicted EMBL EDL79267.1
ORF Names:	rCG_27156 EMBL EDL79267.1

Organism

Rattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000008046

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	1255 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	plasma membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3ZLC3 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 03409140A92B915B	FASTA	1,255	137,191
	10 20 30 40 50 60 MNRPLSAEAE EELEWQVASR RRKAWAKCRS SWQASETEDL STETTTQDED EDDEEDLPGA 70 80 90 100 110 120 KLPAAAGRGN VPNEKIAIWL KDCRTPLGAS LDEQSSVGPK GVLLRNGGSF EDDLSLGAEA 130 140 150 160 170 180 NHLHEPDAQV ENCNNILAKE RRLQFHQKGR SMNSTGSGKS SGTVSSVSEL LELYEEDPEE 190 200 210 220 230 240 ILYNLGFGRD EPDIASKIPS RFFNSSSFAR GIDIKVFLSA QMQRMEVENP NYALTSRFRQ 250 260 270 280 290 300 IEVLTTVANA FSSLYSQVSG TPLQRIGSMS SVTSTKEAAD CPPPLTRSNT ANRLMKTLSK 310 320 330 340 350 360 LNLCVDKTEK AEGSSTPAAE KGRSLSVSLS EDGGGGKSDP KPQKVIKKKE SSSMLATVTE 370 380 390 400 410 420 EVSGSSSTIT DSIDADRLSD EAESNISHKV ESEENGEAHS QNDALRQSAV TDPDFGHDGG 430 440 450 460 470 480 SMSSLCELES SSELKSAQAS SSEKEPCATL TIPSIRNIMV QQKDSFEMEE VQSTEGEAPH 490 500 510 520 530 540 VPATCQLSLA KSKRDHLLRT ASQHSDSSGF AEDSTDCLSL NHLQVHESLQ AMGSSADSCD 550 560 570 580 590 600 SETTVTSLGE DHVTPTAPDQ PYFNESEEES LASLQKGRAK VIVAEKRKAD NQDFPHCATA 610 620 630 640 650 660 ENAGNNESVK GPCEPGPQIT ETETEEEPPL AATGELLREG SGESDMDKGS ECEFAQYTTH 670 680 690 700 710 720 HILRSLTSFE EAQGSGMSSK KKTEFPSSVD RVNTALQRAQ MKVCSMSGQR VGRSLIKSKD 730 740 750 760 770 780 LLKQRYFLAK AGYPLRRSQS LPTTLLSPVR VVSSVNVRLS PGKETRCSPP SFTYKYTPEE 790 800 810 820 830 840 EQELEKQVTE HDGQSLVKST IFIPPSSVKK EEAPQSEGTR LEECHHGRLA PCPQFAPISQ 850 860 870 880 890 900 STCSLHSVHS EWQDRPLCEH MRTLSAHSVP NISGAACSAF SSPFGCPYSH RHAAHPCRPC 910 920 930 940 950 960 PVNPPSAIEM QLRRVLHDIR NSLQNLSQYP MTRGPDLAAA PYSTQKSSVL PLYENTFQEL 970 980 990 1000 1010 1020 QVVRRSLNLF RTQMMDLELA MLRQQTVVYP HMTEEDRYEV DQLQGLRNSV RMELQDLELQ 1030 1040 1050 1060 1070 1080 LEERLLGLDE QLRAVRVPSP FRSSALPGMC GSRSADNLSC PSPLNVMEPV TELMREQSYL 1090 1100 1110 1120 1130 1140 KSELGLSLGD MGYEIPPGES SESVFSQATS ESSSVCSSPS HTNRRSRGPS GSKPRARLVA 1150 1160 1170 1180 1190 1200 RKKIFRASVA LTPTAPSRTG SVQTPPDLES SEEAGAAEEA SQVVGLTSHV EEEPEDLSLM 1210 1220 1230 1240 1250 PTAEEMHRNV EQDELQQVIR EIKESIVGEI RREIVSGLLA AVSSSKASAS KQDSH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000008046.
[2]	"Gene and alternative splicing annotation with AIR." Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G. Genome Res. 15:54-66(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDL79267.1.
[3]	Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDL79267.1.
[4]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000008046.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR06024309 Genomic DNA. No translation available. CH473949 Genomic DNA. Translation: EDL79267.1.
IPI	IPI00870198.
RefSeq	NP_001101208.1. NM_001107738.1.
UniGene	Rn.12870.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000008046; ENSRNOP00000008046; ENSRNOG00000005865.
GeneID	311146.
KEGG	rno:311146.
Organism-specific databases
CTD	6744.
RGD	1310767. Ssfa2.
Phylogenomic databases
GeneTree	ENSGT00530000063345.
OMA	QSTCSLH.
OrthoDB	EOG4N30PG.
Family and domain databases
InterPro	IPR026648. SSFA2. [Graphical view]
PANTHER	PTHR17469:SF8. PTHR17469:SF8. 1 hit.
ProtoNet	Search...
Other
NextBio	663062.

Entry information

Entry name

D3ZLC3_RAT

Accession

Primary (citable) accession number: D3ZLC3

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	April 3, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)