Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

D3ZLC3

- D3ZLC3_RAT

UniProt

D3ZLC3 - D3ZLC3_RAT

Protein
Submitted name:

Protein Ssfa2

Gene

Ssfa2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Ssfa2Imported
    Submitted name:
    Sperm specific antigen 2 (Predicted)Imported
    Gene namesi
    Name:Ssfa2Imported
    Synonyms:Ssfa2_predictedImported
    ORF Names:rCG_27156Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 3

    Organism-specific databases

    RGDi1310767. Ssfa2.

    Subcellular locationi

    GO - Cellular componenti

    1. plasma membrane Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063345.
    OMAiQSTCSLH.
    OrthoDBiEOG7S21X2.
    TreeFamiTF331566.

    Family and domain databases

    InterProiIPR029325. IP3R-bd.
    IPR026648. SSFA2.
    IPR029326. SSFA2_C.
    [Graphical view]
    PANTHERiPTHR17469:SF11. PTHR17469:SF11. 1 hit.
    PfamiPF14722. KRAP_IP3R_bind. 1 hit.
    PF14723. SSFA2_C. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZLC3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRPLSAEAE EELEWQVASR RRKAWAKCRS SWQASETEDL STETTTQDED     50
    EDDEEDLPGA KLPAAAGRGN VPNEKIAIWL KDCRTPLGAS LDEQSSVGPK 100
    GVLLRNGGSF EDDLSLGAEA NHLHEPDAQV ENCNNILAKE RRLQFHQKGR 150
    SMNSTGSGKS SGTVSSVSEL LELYEEDPEE ILYNLGFGRD EPDIASKIPS 200
    RFFNSSSFAR GIDIKVFLSA QMQRMEVENP NYALTSRFRQ IEVLTTVANA 250
    FSSLYSQVSG TPLQRIGSMS SVTSTKEAAD CPPPLTRSNT ANRLMKTLSK 300
    LNLCVDKTEK AEGSSTPAAE KGRSLSVSLS EDGGGGKSDP KPQKVIKKKE 350
    SSSMLATVTE EVSGSSSTIT DSIDADRLSD EAESNISHKV ESEENGEAHS 400
    QNDALRQSAV TDPDFGHDGG SMSSLCELES SSELKSAQAS SSEKEPCATL 450
    TIPSIRNIMV QQKDSFEMEE VQSTEGEAPH VPATCQLSLA KSKRDHLLRT 500
    ASQHSDSSGF AEDSTDCLSL NHLQVHESLQ AMGSSADSCD SETTVTSLGE 550
    DHVTPTAPDQ PYFNESEEES LASLQKGRAK VIVAEKRKAD NQDFPHCATA 600
    ENAGNNESVK GPCEPGPQIT ETETEEEPPL AATGELLREG SGESDMDKGS 650
    ECEFAQYTTH HILRSLTSFE EAQGSGMSSK KKTEFPSSVD RVNTALQRAQ 700
    MKVCSMSGQR VGRSLIKSKD LLKQRYFLAK AGYPLRRSQS LPTTLLSPVR 750
    VVSSVNVRLS PGKETRCSPP SFTYKYTPEE EQELEKQVTE HDGQSLVKST 800
    IFIPPSSVKK EEAPQSEGTR LEECHHGRLA PCPQFAPISQ STCSLHSVHS 850
    EWQDRPLCEH MRTLSAHSVP NISGAACSAF SSPFGCPYSH RHAAHPCRPC 900
    PVNPPSAIEM QLRRVLHDIR NSLQNLSQYP MTRGPDLAAA PYSTQKSSVL 950
    PLYENTFQEL QVVRRSLNLF RTQMMDLELA MLRQQTVVYP HMTEEDRYEV 1000
    DQLQGLRNSV RMELQDLELQ LEERLLGLDE QLRAVRVPSP FRSSALPGMC 1050
    GSRSADNLSC PSPLNVMEPV TELMREQSYL KSELGLSLGD MGYEIPPGES 1100
    SESVFSQATS ESSSVCSSPS HTNRRSRGPS GSKPRARLVA RKKIFRASVA 1150
    LTPTAPSRTG SVQTPPDLES SEEAGAAEEA SQVVGLTSHV EEEPEDLSLM 1200
    PTAEEMHRNV EQDELQQVIR EIKESIVGEI RREIVSGLLA AVSSSKASAS 1250
    KQDSH 1255
    Length:1,255
    Mass (Da):137,191
    Last modified:April 20, 2010 - v1
    Checksum:i03409140A92B915B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06024309 Genomic DNA. No translation available.
    CH473949 Genomic DNA. Translation: EDL79267.1.
    RefSeqiNP_001101208.1. NM_001107738.1.
    UniGeneiRn.12870.

    Genome annotation databases

    EnsembliENSRNOT00000008046; ENSRNOP00000008046; ENSRNOG00000005865.
    GeneIDi311146.
    KEGGirno:311146.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06024309 Genomic DNA. No translation available.
    CH473949 Genomic DNA. Translation: EDL79267.1 .
    RefSeqi NP_001101208.1. NM_001107738.1.
    UniGenei Rn.12870.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000008046 ; ENSRNOP00000008046 ; ENSRNOG00000005865 .
    GeneIDi 311146.
    KEGGi rno:311146.

    Organism-specific databases

    CTDi 6744.
    RGDi 1310767. Ssfa2.

    Phylogenomic databases

    GeneTreei ENSGT00530000063345.
    OMAi QSTCSLH.
    OrthoDBi EOG7S21X2.
    TreeFami TF331566.

    Miscellaneous databases

    NextBioi 663062.
    PROi D3ZLC3.

    Family and domain databases

    InterProi IPR029325. IP3R-bd.
    IPR026648. SSFA2.
    IPR029326. SSFA2_C.
    [Graphical view ]
    PANTHERi PTHR17469:SF11. PTHR17469:SF11. 1 hit.
    Pfami PF14722. KRAP_IP3R_bind. 1 hit.
    PF14723. SSFA2_C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZLC3_RAT
    AccessioniPrimary (citable) accession number: D3ZLC3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3