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Protein

Olfactory receptor

Gene

LOC100910822

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Keywords - Biological processi

OlfactionUniRule annotationSAAS annotation, Sensory transduction

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptorUniRule annotation
Gene namesi
Name:LOC100910822Imported
Synonyms:Olr1223Imported
ORF Names:rCG_40982Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi6496074. LOC100910822.
1333270. Olr1223.

Subcellular locationi

  • Cell membrane UniRule annotationSAAS annotation; Multi-pass membrane protein UniRule annotationSAAS annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei28 – 48HelicalUniRule annotationAdd BLAST21
Transmembranei60 – 79HelicalUniRule annotationAdd BLAST20
Transmembranei104 – 123HelicalUniRule annotationAdd BLAST20
Transmembranei143 – 161HelicalUniRule annotationAdd BLAST19
Transmembranei203 – 228HelicalUniRule annotationAdd BLAST26
Transmembranei240 – 263HelicalUniRule annotationAdd BLAST24
Transmembranei275 – 295HelicalUniRule annotationAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000041702.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini44 – 293G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST250

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410JAE8. Eukaryota.
ENOG41117AS. LUCA.
GeneTreeiENSGT00840000129947.
KOiK04257.
OMAiFCVFINA.
OrthoDBiEOG091G0AZH.
TreeFamiTF352753.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZK06-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEKTMENKS SVSEFILMGL TEQPELQLPL FVLFLMNYTA TVMGNLSLMS
60 70 80 90 100
LISLNSNLHT PVYFFIFNLS FIDFCYSMVS TPKMLMSFVL EKNTISFSGC
110 120 130 140 150
MTQLFFFCVF INAESYVLTA MAYDRYVAIG QPLMYQVVMS PKICCLLIFG
160 170 180 190 200
SYLMGFVSAM AHTGCMVRLT FCDSNIINHY MCDIFPLLQL SCSSTYVNEL
210 220 230 240 250
MSYVAVGTAI ILCSLIILVS YALILFNIIH MSSGKGWSKA LGTCGSHIIT
260 270 280 290 300
VSLFYGSGLL AYVKPSSAET VGQAKFFSVF YTLLVPMLNP LIYSLRNKDV
310
KLAMQKSWKR ITS
Length:313
Mass (Da):35,096
Last modified:April 20, 2010 - v1
Checksum:i93A897B2899B96AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07069844 Genomic DNA. No translation available.
AABR07069898 Genomic DNA. No translation available.
CH474180 Genomic DNA. Translation: EDL84261.1.
RefSeqiNP_001000441.1. NM_001000441.1.
XP_006227048.1. XM_006226986.2.
XP_008764313.1. XM_008766091.2.
UniGeneiRn.143544.

Genome annotation databases

EnsembliENSRNOT00000049709; ENSRNOP00000041702; ENSRNOG00000046892.
ENSRNOT00000076963; ENSRNOP00000068185; ENSRNOG00000051138.
GeneIDi100910822.
300549.
KEGGirno:100910822.
rno:300549.
UCSCiRGD:1333270. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07069844 Genomic DNA. No translation available.
AABR07069898 Genomic DNA. No translation available.
CH474180 Genomic DNA. Translation: EDL84261.1.
RefSeqiNP_001000441.1. NM_001000441.1.
XP_006227048.1. XM_006226986.2.
XP_008764313.1. XM_008766091.2.
UniGeneiRn.143544.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000041702.

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000049709; ENSRNOP00000041702; ENSRNOG00000046892.
ENSRNOT00000076963; ENSRNOP00000068185; ENSRNOG00000051138.
GeneIDi100910822.
300549.
KEGGirno:100910822.
rno:300549.
UCSCiRGD:1333270. rat.

Organism-specific databases

CTDi300549.
RGDi6496074. LOC100910822.
1333270. Olr1223.

Phylogenomic databases

eggNOGiENOG410JAE8. Eukaryota.
ENOG41117AS. LUCA.
GeneTreeiENSGT00840000129947.
KOiK04257.
OMAiFCVFINA.
OrthoDBiEOG091G0AZH.
TreeFamiTF352753.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZK06_RAT
AccessioniPrimary (citable) accession number: D3ZK06
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 30, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.