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D3ZIQ8

- D3ZIQ8_RAT

UniProt

D3ZIQ8 - D3ZIQ8_RAT

Protein
Submitted name:

Protein Narg2

Gene

Ice2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Narg2Imported
    Gene namesi
    Name:Ice2Imported
    Synonyms:Narg2Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 8

    Organism-specific databases

    RGDi1585038. Ice2.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000006883.
    OMAiLMGFFPF.
    OrthoDBiEOG7RNJZS.
    TreeFamiTF106272.

    Family and domain databases

    InterProiIPR019535. NARG2_C.
    [Graphical view]
    PfamiPF10505. NARG2_C. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZIQ8-1 [UniParc]FASTAAdd to Basket

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    MSSGITMSEP RLNWDVTPKN GLKVFFSPEN YKDHSMAPSL KELYILSNRR    50
    IGENVSVSAN SVENEPAVSS ATQAKEKVGM ILLPKPRVPY PRFSRFSQRE 100
    QRTFVDLLVK YAKIPSSSKT VGTNTNEFLQ YLDMKKHVNE EVNEFLKFLQ 150
    NSAKKCAQDY NMLSDEARLF TEQILRACIE QVKKYPEFYT LHEVTSLMGF 200
    FPFKIEMGLK LEKTLLVLGS AKFVKTAFPS MPVKLQLSKE DMSSIENPQQ 250
    QAEAMHCDIS KDPNAEKLVS RYHPQIALTS QALFTLLNNH GPSYKEQWEI 300
    PVCVQMIAVE GSKPVKVIYI NSPLPRKQMT MRERNQIFHE VPLKHIFSKT 350
    TSVPVSAVFM DKPEEYTSEV DISTEASECR KIETLENLDL DFDGDVTELE 400
    TFGVTTTSPS RSPSSESDSS APIMTDVHTA PKVTAIPVAP AAPVTPAAPV 450
    APVVAPVAPV VAPVAPAAPV TPVTPEASAI PNITDDSRSL CQILMKQLQK 500
    EKQLFSGVES GPEACKNKDD QGLEPCAEEG PSANAKSLTQ DSEVHRTEEI 550
    SNESDVGALC TSDERQSVQK NADNPNETAT ASETADTEKG IPCGSDTDED 600
    CLIIDTESKS NSDGRTAGLG SSPNSSAQAS VENQTTTTVS EESCVLKKPI 650
    KRVYKKFDPV GEILKMQDEL LKPVSRTIPE LPLTNSEESK QPSASEQPSA 700
    TLDASTWPKS SWPSAFQKPK GRLPYELQDY VEDTSEYVAP QEGNFVYKLF 750
    SLQDLLLLVR CSVQRVETRP RSKKRKKIRR QFPVYVLPKV EYQGCYGVEA 800
    LTESELCRFW TESLLHSNCS FYVGHIDAFT SKLFMLEEIT SEELKEKLAA 850
    LKISSLFNIL QHILKKLCSL QEGSYLLSHA AEDSSLLIYK TSDGKVTRTA 900
    YNLHKAHCDL PGVPSSLSVP WVPLDPSYLL PYHIHHGRIP CTFPPKSLRP 950
    AAQPKVGATR MPTRNHRNPV SRETKSSCLP VQQVENEGVA QNKRKIM 997
    Length:997
    Mass (Da):110,806
    Last modified:April 3, 2013 - v2
    Checksum:i88D3374A81980C4F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06055748 Genomic DNA. No translation available.
    RefSeqiNP_001178037.1. NM_001191108.1.
    XP_006243464.1. XM_006243402.1.
    UniGeneiRn.230480.

    Genome annotation databases

    EnsembliENSRNOT00000013742; ENSRNOP00000013742; ENSRNOG00000010160.
    GeneIDi691379.
    KEGGirno:691379.
    UCSCiRGD:1585038. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06055748 Genomic DNA. No translation available.
    RefSeqi NP_001178037.1. NM_001191108.1.
    XP_006243464.1. XM_006243402.1.
    UniGenei Rn.230480.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000013742 ; ENSRNOP00000013742 ; ENSRNOG00000010160 .
    GeneIDi 691379.
    KEGGi rno:691379.
    UCSCi RGD:1585038. rat.

    Organism-specific databases

    CTDi 79664.
    RGDi 1585038. Ice2.

    Phylogenomic databases

    GeneTreei ENSGT00390000006883.
    OMAi LMGFFPF.
    OrthoDBi EOG7RNJZS.
    TreeFami TF106272.

    Miscellaneous databases

    NextBioi 35567832.

    Family and domain databases

    InterProi IPR019535. NARG2_C.
    [Graphical view ]
    Pfami PF10505. NARG2_C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZIQ8_RAT
    AccessioniPrimary (citable) accession number: D3ZIQ8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 30 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3