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Protein
Submitted name:

Serum response factor

Gene

Srf

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-RNO-5663220 RHO GTPases Activate Formins

Names & Taxonomyi

Protein namesi
Submitted name:
Serum response factorImported
Submitted name:
Similar to serum response factor (Predicted)Imported
Gene namesi
Name:SrfImported
Synonyms:RGD1559787_predictedImported
ORF Names:rCG_43683Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 9

Organism-specific databases

RGDi1559787 Srf

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PeptideAtlasiD3ZHH8

Expressioni

Gene expression databases

BgeeiENSRNOG00000018232

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000058149

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 197MADS-boxInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiKOG0015 Eukaryota
COG5068 LUCA
GeneTreeiENSGT00400000022158
KOiK04378
OMAiTSTSMQV
OrthoDBiEOG091G0X24
TreeFamiTF318482

Family and domain databases

CDDicd00266 MADS_SRF_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033897 MADS_SRF-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZHH8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPSQAGAAA ALGRGSALGG SLNRTPTGRP GGSGGTRGAN GGRVPGNGAG
60 70 80 90 100
LGPGRLEREA AAAAAPTAGA LYSGSEGDSE SGEEEELGAE RRGLKRSLSE
110 120 130 140 150
MELGVVVGGP EAAAAAAGGY GPVSGAVSGA KPGKKTRGRV KIKMEFIDNK
160 170 180 190 200
LRRYTTFSKR KTGIMKKAYE LSTLTGTQVL LLVASETGHV YTFATRKLQP
210 220 230 240 250
MITSETGKAL IQTCLNSPDS PPRSDPSTDQ RMSATGFEEP DLTYQVSESD
260 270 280 290 300
SSGETKDTLK PAFTVTNLPG TTSTIQTAPS TSTTMQVSSG PSFPITNYLA
310 320 330 340 350
PVSASVSPSA VSSANGTVLK STGSGPVSSG GLMQLPTSFT LMPGGAVAQQ
360 370 380 390 400
VPVQAIHVHQ APQQASPSRD SSTDLTQTSS SGTVTLPATI MTSSVPTTVG
410 420 430 440 450
GHMMYPSPHA VMYAPTSGLA DGSLTVLNAF SQAPSTMQVS HSQVQEPGGV
460 470 480 490 500
PQVFLTAPSG TVQIPVSAVQ LHQMAVIGQQ AGSSSNLTEL QVVNLDATHS

TKSE
Length:504
Mass (Da):51,175
Last modified:April 3, 2013 - v2
Checksum:i814091FD4CAF8918
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07066803 Genomic DNA No translation available.
CH473987 Genomic DNA Translation: EDM18828.1
RefSeqiNP_001102772.1, NM_001109302.1
XP_006244619.1, XM_006244557.3
UniGeneiRn.1501

Genome annotation databases

EnsembliENSRNOT00000061430; ENSRNOP00000058149; ENSRNOG00000018232
GeneIDi501099
KEGGirno:501099
UCSCiRGD:1559787 rat

Similar proteinsi

Entry informationi

Entry nameiD3ZHH8_RAT
AccessioniPrimary (citable) accession number: D3ZHH8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: April 25, 2018
This is version 73 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health