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D3ZH34

- D3ZH34_RAT

UniProt

D3ZH34 - D3ZH34_RAT

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Protein
Submitted name:

Protein Fam46a

Gene

Fam46a

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. poly(A) RNA binding Source: Ensembl

GO - Biological processi

  1. regulation of blood coagulation Source: Ensembl
  2. regulation of gene expression Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Fam46aImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Fam46aImported
Synonyms:RGD1311381_predictedImported
ORF Names:rCG_25484Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 8

Organism-specific databases

RGDi1311381. Fam46a.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00500000044785.
OMAiGHCLDYC.
OrthoDBiEOG74R1QS.
TreeFamiTF315239.

Family and domain databases

InterProiIPR012937. DUF1693.
[Graphical view]
PfamiPF07984. DUF1693. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZH34-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHQRYFWTDQ GQVAFGGHYM AESEGYFAMA EDELTGGPYI PLGGDFGGGG
60 70 80 90 100
SFGDRCSDYC ESPTAHCNVL NWEQVQRLDG ILSETIPIHG RGNFPTLELQ
110 120 130 140 150
PSLIVKVVRR RLEEKSIGVR DVRLNGSAAS HVLHQDSGLG YKDLDLIFCA
160 170 180 190 200
DLRGEEEFQT VKDVVLDCLL DFLPEGVNKE KITPLTLKEA YVQKMVKVCN
210 220 230 240 250
DSDRWSLISL SNNSGKNVEL KFVDSLRRQF EFSVDSFQIK LDSLLLFYEC
260 270 280 290 300
SENPMTETFH PTIIGESVYG DFHEAFDHLC NKIIATRNPE EIRGGGLLKY
310 320 330 340 350
CNLLVRGFRP ASEEIKTLQR YMCSRFFIDF SDIGEQQRKL ESYLQNHFVG
360 370 380 390 400
LEDRKYDYLM TLHGVVNEST VCLMGHERRQ TLNLITMLAI RVLADQNVIP
410 420 430 440
NVANVTCYYQ PAPYVADANF SNYYIAQVQP VFTCQQQTYS TWLPCN
Length:446
Mass (Da):50,766
Last modified:April 20, 2010 - v1
Checksum:i8B6761ABDB0FFF01
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06056174 Genomic DNA. No translation available.
CH473954 Genomic DNA. Translation: EDL77647.1.
RefSeqiNP_001100314.1. NM_001106844.1.
UniGeneiRn.788.

Genome annotation databases

EnsembliENSRNOT00000056937; ENSRNOP00000053775; ENSRNOG00000010240.
GeneIDi300870.
KEGGirno:300870.
UCSCiRGD:1311381. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06056174 Genomic DNA. No translation available.
CH473954 Genomic DNA. Translation: EDL77647.1 .
RefSeqi NP_001100314.1. NM_001106844.1.
UniGenei Rn.788.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000056937 ; ENSRNOP00000053775 ; ENSRNOG00000010240 .
GeneIDi 300870.
KEGGi rno:300870.
UCSCi RGD:1311381. rat.

Organism-specific databases

CTDi 55603.
RGDi 1311381. Fam46a.

Phylogenomic databases

GeneTreei ENSGT00500000044785.
OMAi GHCLDYC.
OrthoDBi EOG74R1QS.
TreeFami TF315239.

Miscellaneous databases

NextBioi 647674.

Family and domain databases

InterProi IPR012937. DUF1693.
[Graphical view ]
Pfami PF07984. DUF1693. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZH34_RAT
AccessioniPrimary (citable) accession number: D3ZH34
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3