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D3ZH34

- D3ZH34_RAT

UniProt

D3ZH34 - D3ZH34_RAT

Protein
Submitted name:

Protein Fam46a

Gene

Fam46a

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Fam46aImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:Fam46aImported
    Synonyms:RGD1311381_predictedImported
    ORF Names:rCG_25484Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 8

    Organism-specific databases

    RGDi1311381. Fam46a.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00500000044785.
    OMAiGHCLDYC.
    OrthoDBiEOG74R1QS.
    TreeFamiTF315239.

    Family and domain databases

    InterProiIPR012937. DUF1693.
    [Graphical view]
    PfamiPF07984. DUF1693. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZH34-1 [UniParc]FASTAAdd to Basket

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    MHQRYFWTDQ GQVAFGGHYM AESEGYFAMA EDELTGGPYI PLGGDFGGGG    50
    SFGDRCSDYC ESPTAHCNVL NWEQVQRLDG ILSETIPIHG RGNFPTLELQ 100
    PSLIVKVVRR RLEEKSIGVR DVRLNGSAAS HVLHQDSGLG YKDLDLIFCA 150
    DLRGEEEFQT VKDVVLDCLL DFLPEGVNKE KITPLTLKEA YVQKMVKVCN 200
    DSDRWSLISL SNNSGKNVEL KFVDSLRRQF EFSVDSFQIK LDSLLLFYEC 250
    SENPMTETFH PTIIGESVYG DFHEAFDHLC NKIIATRNPE EIRGGGLLKY 300
    CNLLVRGFRP ASEEIKTLQR YMCSRFFIDF SDIGEQQRKL ESYLQNHFVG 350
    LEDRKYDYLM TLHGVVNEST VCLMGHERRQ TLNLITMLAI RVLADQNVIP 400
    NVANVTCYYQ PAPYVADANF SNYYIAQVQP VFTCQQQTYS TWLPCN 446
    Length:446
    Mass (Da):50,766
    Last modified:April 20, 2010 - v1
    Checksum:i8B6761ABDB0FFF01
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06056174 Genomic DNA. No translation available.
    CH473954 Genomic DNA. Translation: EDL77647.1.
    RefSeqiNP_001100314.1. NM_001106844.1.
    UniGeneiRn.788.

    Genome annotation databases

    EnsembliENSRNOT00000056937; ENSRNOP00000053775; ENSRNOG00000010240.
    GeneIDi300870.
    KEGGirno:300870.
    UCSCiRGD:1311381. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06056174 Genomic DNA. No translation available.
    CH473954 Genomic DNA. Translation: EDL77647.1 .
    RefSeqi NP_001100314.1. NM_001106844.1.
    UniGenei Rn.788.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000056937 ; ENSRNOP00000053775 ; ENSRNOG00000010240 .
    GeneIDi 300870.
    KEGGi rno:300870.
    UCSCi RGD:1311381. rat.

    Organism-specific databases

    CTDi 55603.
    RGDi 1311381. Fam46a.

    Phylogenomic databases

    GeneTreei ENSGT00500000044785.
    OMAi GHCLDYC.
    OrthoDBi EOG74R1QS.
    TreeFami TF315239.

    Miscellaneous databases

    NextBioi 647674.

    Family and domain databases

    InterProi IPR012937. DUF1693.
    [Graphical view ]
    Pfami PF07984. DUF1693. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZH34_RAT
    AccessioniPrimary (citable) accession number: D3ZH34
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3