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Protein
Submitted name:

Protein Edar

Gene

Edar

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-RNO-5669034. TNFs bind their physiological receptors.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein EdarImported
Gene namesi
Name:EdarImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1561714. Edar.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei184 – 210HelicalSequence analysisAdd BLAST27

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500305332627 – 448Sequence analysisAdd BLAST422

Proteomic databases

PaxDbiD3ZGP2.

Expressioni

Gene expression databases

BgeeiENSRNOG00000028598.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029258.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IGTD. Eukaryota.
ENOG41104RU. LUCA.
GeneTreeiENSGT00730000111254.
InParanoidiD3ZGP2.
KOiK05162.
OMAiPNTKECV.
OrthoDBiEOG091G0ADI.
PhylomeDBiD3ZGP2.
TreeFamiTF331385.

Family and domain databases

Gene3Di1.10.533.10. 1 hit.
InterProiIPR011029. DEATH-like_dom.
[Graphical view]
SUPFAMiSSF47986. SSF47986. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZGP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHVGDCKWM SWLPVLVVSL MCSAKAEDSN CGENEYHNQT TGLCQQCPPC
60 70 80 90 100
RPGEEPYMSC GYGTKDEDYG CVPCPAEKFS KGGYQICRRH KDCEGFFRAT
110 120 130 140 150
VLTPGDMEND AECGPCLPGY YMLENRPRNI YGMVCYSCLL APPNTKECVG
160 170 180 190 200
ATSGVSAHSS STSGGSTLSP FQHAHKELSS QGHLATALII AMSTIFIMAI
210 220 230 240 250
AIVLIIMFYI MKTKPSAPAC CSSPPGKSAE APANTHEEKK EAPDSVVTFP
260 270 280 290 300
ENGEFQKLTA TPTKTPKSEN DASSENEQLL SRSVDSDEEP APDKQGSPEL
310 320 330 340 350
CLLSLVHLAR EKSVASNKSA GIQSRRKKIL DVYANVCGVV EGLSPTELPF
360 370 380 390 400
DCLEKTSRML SSTYNSEKAV VKTWRHLAES FGLKRDEIGG MTDGMQLFDR
410 420 430 440
ISTAGYSIPE LLTKLVQIER LDAVESLCAD ILEWAGVVPP ASPPPAAS
Length:448
Mass (Da):48,448
Last modified:April 20, 2010 - v1
Checksum:i47510CEFA612B21D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07044956 Genomic DNA. No translation available.
AABR07044957 Genomic DNA. No translation available.
AABR07044958 Genomic DNA. No translation available.
RefSeqiNP_001178828.1. NM_001191899.1.
XP_006256443.1. XM_006256381.3.
UniGeneiRn.133578.

Genome annotation databases

EnsembliENSRNOT00000030348; ENSRNOP00000029258; ENSRNOG00000028598.
GeneIDi365581.
KEGGirno:365581.
UCSCiRGD:1561714. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07044956 Genomic DNA. No translation available.
AABR07044957 Genomic DNA. No translation available.
AABR07044958 Genomic DNA. No translation available.
RefSeqiNP_001178828.1. NM_001191899.1.
XP_006256443.1. XM_006256381.3.
UniGeneiRn.133578.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029258.

Proteomic databases

PaxDbiD3ZGP2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000030348; ENSRNOP00000029258; ENSRNOG00000028598.
GeneIDi365581.
KEGGirno:365581.
UCSCiRGD:1561714. rat.

Organism-specific databases

CTDi10913.
RGDi1561714. Edar.

Phylogenomic databases

eggNOGiENOG410IGTD. Eukaryota.
ENOG41104RU. LUCA.
GeneTreeiENSGT00730000111254.
InParanoidiD3ZGP2.
KOiK05162.
OMAiPNTKECV.
OrthoDBiEOG091G0ADI.
PhylomeDBiD3ZGP2.
TreeFamiTF331385.

Enzyme and pathway databases

ReactomeiR-RNO-5669034. TNFs bind their physiological receptors.

Gene expression databases

BgeeiENSRNOG00000028598.

Family and domain databases

Gene3Di1.10.533.10. 1 hit.
InterProiIPR011029. DEATH-like_dom.
[Graphical view]
SUPFAMiSSF47986. SSF47986. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZGP2_RAT
AccessioniPrimary (citable) accession number: D3ZGP2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 2, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.