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D3ZG78

- D3ZG78_RAT

UniProt

D3ZG78 - D3ZG78_RAT

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Protein
Submitted name:

Protein Zzef1

Gene

Zzef1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Zzef1Imported
Gene namesi
Name:Zzef1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 10

Organism-specific databases

RGDi1311189. Zzef1.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00700000104406.
InParanoidiD3ZG78.
OMAiWMLEMKQ.
OrthoDBiEOG76MK7D.
PhylomeDBiD3ZG78.
TreeFamiTF331572.

Family and domain databases

Gene3Di1.10.238.10. 1 hit.
2.60.120.260. 1 hit.
2.60.120.290. 1 hit.
InterProiIPR004939. APC_su10/DOC_dom.
IPR000859. CUB_dom.
IPR011992. EF-hand-dom_pair.
IPR002048. EF_hand_dom.
IPR008979. Galactose-bd-like.
IPR000433. Znf_ZZ.
[Graphical view]
PfamiPF03256. APC10. 1 hit.
PF00569. ZZ. 2 hits.
[Graphical view]
SMARTiSM00291. ZnF_ZZ. 2 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
PROSITEiPS51284. DOC. 1 hit.
PS50222. EF_HAND_2. 1 hit.
PS01357. ZF_ZZ_1. 1 hit.
PS50135. ZF_ZZ_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZG78-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGNAPSNSSE DEAAAAGGEG WSPHQDWAAD SGATPGPGPA AAVLPSAAAL
60 70 80 90 100
LEPARLREAA AALRPAPPCE SLVSRHHGAL LRWLEERLGR GEESVTLEQF
110 120 130 140 150
RELLEARGAG CSGEQFEEAF AQFDAEGDGT VDAENMLEAL KNSSGANLQG
160 170 180 190 200
ELSHVIRQLQ ACSLVPGFID IFSESKEGLG THSSMILRFL HRNRVSSMVI
210 220 230 240 250
PYPMLDHCNN MCTMRSSVLK DSLDQLLQKE KESPGDLARS PEMDKLKSVT
260 270 280 290 300
KCYAYIETSS NPADIYRMTN GETSSYWQSD GSARSHWIRL KMKPDVVLRH
310 320 330 340 350
LSIAVAATDQ SYMPQQVTVA VGRSASDLQE VRDVHIPSNV TGYVTLLENA
360 370 380 390 400
NISQLYVQIN IKRCLSDGCD TRIHGLRAVG FQRVKKSGVS VSDASAIWYW
410 420 430 440 450
SLLTSLVTAS METNPAFVQT VLHNTQKALQ HMPPLSLSPG STDFSTFLSP
460 470 480 490 500
NVLEEVDSFL IRITSCCSTP EVELTLLAFA LARGSIAKVM SSLCAISDHL
510 520 530 540 550
DTQYDASSLI SSMASVRQSL LLKYGKPLQL TLQACDVKGK EDKSGPENLL
560 570 580 590 600
VEPWTRDGFL TETGKTRAST IFSAGTESAF QVTQIRIMVR RGGIGAQCGL
610 620 630 640 650
VFAYNSPSDK FHAEEHFKRF EKYDRWKLQE LRQFVKSRIG CSPDDLGEDD
660 670 680 690 700
PIGWFELEEE WDEADVKLQQ CRVAKFLMVK FLCTRQESAE RLGVQGLSIS
710 720 730 740 750
GYLRPARAEA EQSILYAHCR RDTENIYGAT LLLRTLQFIQ QLAHDLVQQK
760 770 780 790 800
ESGLKYKSFL DFAGLDLQIF WNFYSKLKQN PREECICAQT LLLQLLQSCF
810 820 830 840 850
SVLQGDPQAV SEEEKPAAQR PEGIQAAKEL YTHLCDVVDR ADGESMPMEI
860 870 880 890 900
LKQEVRNTLL NGAAIFFPDR QTRRNQLFTM MKNVTEHERK QSLQLTFRSL
910 920 930 940 950
CTYFSDKDPG GLLLLPEKSD LATMNTSEVL AVMNTLLSVA ARECELLMLG
960 970 980 990 1000
RAHGEVGSVL FSLFWSVQGS LLSWCFLQLK STDAAAKELA MDLIEKYVGQ
1010 1020 1030 1040 1050
FLASMRVILE SLLSQYSGKT IVEKLCNSVF SMAARQLVIF LLDFCTLDVS
1060 1070 1080 1090 1100
HCTLLREFST LTELLKKLCS DPEGGLSKLD VETWQQEQPV VLHTWTKEST
1110 1120 1130 1140 1150
HNYENNCHEV SVFVSPGATY FEVEFDERCE TEKRYDYLEF TDSRGGKTRY
1160 1170 1180 1190 1200
DTKVGTYKWP KKVTFKDGPR LQFLFHSDSS NNEWGYKFTV TAYGLPDVAV
1210 1220 1230 1240 1250
SWGLDLQLLV SRLMGRLASQ CMALKSVHQL GSNLAISQAK LTAVLNSPLW
1260 1270 1280 1290 1300
KPVFRHQICP ELELEASWPT HPHQDGKEVK NIPDDPCRHF LLDFAQSEPA
1310 1320 1330 1340 1350
QNFCGPYSEL FKGFIQACRK QAPKTDIVAG STIDQAVNAT FAALVYRTPD
1360 1370 1380 1390 1400
LYEKLQKYVH SGGKIALPEE FSQVYSLADG IRIWMLEMKQ KSLVSMGNDS
1410 1420 1430 1440 1450
EEKRGLETAE VNPENLAKEC IQKSLLLLKF LPMSKSSKEN CDKLVPVDET
1460 1470 1480 1490 1500
DRLQPLDRRQ RTSSVVEEHF QGSASPTEAA TPAADDKSPG LEMQPKLLPS
1510 1520 1530 1540 1550
SGPSAAEVST AEEPSSPSTP TRRPPFTRGR LRLLSFRSME ETRPVPTVKE
1560 1570 1580 1590 1600
KYPVLKDVMD FIKDQSLSHE SIVKVLSLRK AQAQSILEVL RIIQYCTESL
1610 1620 1630 1640 1650
GQPHCFHPPY ILFLLELLTC QKDFTNYFGH LEGCGADLHK EIRDTYYQLV
1660 1670 1680 1690 1700
LFLVKAIKGF SSINDRSLLP AVSCVQTALL HLLDMGWEPS DLAFFVDIQL
1710 1720 1730 1740 1750
PDLLMNMSQE NISIHDSVIS QWSEEDELAD AKQNSEWMDE CQDGMFEAWY
1760 1770 1780 1790 1800
EKIAQEDPEK QRKMHMFIAR YCDLLNVDIS CDGCDEIAPW HRYRCLQCSD
1810 1820 1830 1840 1850
MDLCKTCFLG GVKPEGHGDD HEMVNMEFTC DHCQGLIIGR RMNCNVCDDF
1860 1870 1880 1890 1900
DLCYGCYAAK KYSYGHLPTH SITAHPMVTI RISDRQRFIQ PYIHNYSWLL
1910 1920 1930 1940 1950
FAALALYSAH LTSTEHVDGE QLDPQARGSA ATLRSQCMQL VGDCLMKAHQ
1960 1970 1980 1990 2000
GKGLKALALL GVLPDGDSTS ENQALPVTVS IQASEEQADA GLFVPCNGKR
2010 2020 2030 2040 2050
ATDKEVGPLD CKQKKKAGED LSIMKDPSCQ IQVSDPPASD HVPPGLPDAE
2060 2070 2080 2090 2100
HPDRSSQAPM EEKAITPSPE QVFAECSQKR ILGLLAAMLP PIKSGPTVPL
2110 2120 2130 2140 2150
IDLEHVLPLM FQVVISNAGH LNETYHLTLG LLGQLIIRLQ PAEVDAAVMK
2160 2170 2180 2190 2200
VLSAKHNLRV GLDWACSMAE ILRSLNNAPL WRDVIATFTD HCIKQLPFQL
2210 2220 2230 2240 2250
KHTNIFTLLV LVGFPQVLCV GTRCVYMDNA NEPHNVIILK HFTEKNRAVI
2260 2270 2280 2290 2300
VDVKTRKRKT VKDYQLVQKG GGQECGTSQA QLSQYSQHFA FIASHLLQTS
2310 2320 2330 2340 2350
MDSHCPEAVE ATWVLSLALK GLYKTLKTHG FEETHATFLH TDLLKLLVKK
2360 2370 2380 2390 2400
CSKGTGFSKT WLLRDLEILS IMLYSSKKEI NTLTEHGDLE LDERGDQEEE
2410 2420 2430 2440 2450
LDRPVSSPGE AEQKKLDPLE SLDEPTRICF LMAHDALNAP LHILRAIYEL
2460 2470 2480 2490 2500
QMKKTDSFFL EVQKRFDGDE LTTDERIRSL AQRWQPSRSL RLEEQSAKAV
2510 2520 2530 2540 2550
DTDMIILPCL SRPARSDQAT SESNPVTQKL ISSTESELQQ SYAKQRRSKS
2560 2570 2580 2590 2600
AALLHKELNC KSKRAVRDYL FRVNEATAVL YARHVLASLL AEWPGHVPVS
2610 2620 2630 2640 2650
EDILELSGPA HMTYILDMFM QLEEKHQWEK ILQKVLQGCR ESMLGTMALA
2660 2670 2680 2690 2700
ACQFMEEPGM EVQVRESKHP YNNNTSFEDK VHIPGAIYLS IKFDPQCNTE
2710 2720 2730 2740 2750
EGCDELAMSS SSDFQQDRHN FSGSQQKWKD FELPGDTLYY RFTSDMSNTE
2760 2770 2780 2790 2800
WGYRFTVTAG HLGRFQTGFE ILKQMLSEER VVPHLPLGKI WEWLVGVACR
2810 2820 2830 2840 2850
QTGHQRLKAI HLLLRIVRCC SHSDLCDLGL LKPLWQLFTH MEYGLFEDVT
2860 2870 2880 2890 2900
QPGILLPLHR ALTELFFVTE NRAQELGLLQ EYLLALTTED HLLRCAAQAL
2910 2920
QNIAAISLAI NYPNKATRLW NVEC
Length:2,924
Mass (Da):328,094
Last modified:April 20, 2010 - v1
Checksum:i2C87834AAAB250D6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06064491 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000036278; ENSRNOP00000031588; ENSRNOG00000024535.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06064491 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000036278 ; ENSRNOP00000031588 ; ENSRNOG00000024535 .

Organism-specific databases

RGDi 1311189. Zzef1.

Phylogenomic databases

GeneTreei ENSGT00700000104406.
InParanoidi D3ZG78.
OMAi WMLEMKQ.
OrthoDBi EOG76MK7D.
PhylomeDBi D3ZG78.
TreeFami TF331572.

Miscellaneous databases

NextBioi 35567288.

Family and domain databases

Gene3Di 1.10.238.10. 1 hit.
2.60.120.260. 1 hit.
2.60.120.290. 1 hit.
InterProi IPR004939. APC_su10/DOC_dom.
IPR000859. CUB_dom.
IPR011992. EF-hand-dom_pair.
IPR002048. EF_hand_dom.
IPR008979. Galactose-bd-like.
IPR000433. Znf_ZZ.
[Graphical view ]
Pfami PF03256. APC10. 1 hit.
PF00569. ZZ. 2 hits.
[Graphical view ]
SMARTi SM00291. ZnF_ZZ. 2 hits.
[Graphical view ]
SUPFAMi SSF49785. SSF49785. 1 hit.
PROSITEi PS51284. DOC. 1 hit.
PS50222. EF_HAND_2. 1 hit.
PS01357. ZF_ZZ_1. 1 hit.
PS50135. ZF_ZZ_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZG78_RAT
AccessioniPrimary (citable) accession number: D3ZG78
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3