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Protein
Submitted name:

RCG42279

Gene

Spcs1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-422085 Synthesis, secretion, and deacylation of Ghrelin

Names & Taxonomyi

Protein namesi
Submitted name:
RCG42279Imported
Submitted name:
Signal peptidase complex subunit 1Imported
Gene namesi
Name:Spcs1Imported
ORF Names:rCG_42279Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 16

Organism-specific databases

RGDi1309125 Spcs1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei83 – 101HelicalSequence analysisAdd BLAST19
Transmembranei107 – 127HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiD3ZFK5
PRIDEiD3ZFK5

Expressioni

Gene expression databases

BgeeiENSRNOG00000018075

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024447

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4112 Eukaryota
ENOG411274V LUCA
GeneTreeiENSGT00390000018321
InParanoidiD3ZFK5
OMAiILPPWPF
OrthoDBiEOG091G116R
TreeFamiTF106122

Family and domain databases

InterProiView protein in InterPro
IPR037713 Spc1
IPR009542 SPC12
PANTHERiPTHR13202 PTHR13202, 1 hit
PTHR13202:SF0 PTHR13202:SF0, 1 hit
PfamiView protein in Pfam
PF06645 SPC12, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZFK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARGGARGCA SPSETSASGA TAEERRLAGR PGCFRYRTSQ ATLLNSQLPS
60 70 80 90 100
FHCRYQSSAT MLEHLSSLPT QMDYKGQKLA EQMFQGIILF SAIVGFIYGY
110 120 130 140 150
VAEQFGWTVY IVMAGFAFSC LLTLPPWPIY RRHPLKWLPV QDSGTEDKKS
160
GDRKIKRHAK NN
Length:162
Mass (Da):18,100
Last modified:July 22, 2015 - v3
Checksum:i891A9EE9C8C5000E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC121615 Genomic DNA No translation available.
CH474046 Genomic DNA Translation: EDL88972.1
UniGeneiRn.3781

Genome annotation databases

EnsembliENSRNOT00000024447; ENSRNOP00000024447; ENSRNOG00000018075
UCSCiRGD:1309125 rat

Similar proteinsi

Entry informationi

Entry nameiD3ZFK5_RAT
AccessioniPrimary (citable) accession number: D3ZFK5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: May 23, 2018
This is version 62 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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