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Protein

Acyl carrier protein

Gene

Ndufab1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Carrier of the growing fatty acid chain in fatty acid biosynthesis.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Fatty acid biosynthesisUniRule annotation, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism

Keywords - Ligandi

UbiquinoneImported

Enzyme and pathway databases

ReactomeiR-RNO-389661. Glyoxylate metabolism and glycine degradation.
R-RNO-611105. Respiratory electron transport.
R-RNO-6799198. Complex I biogenesis.
R-RNO-77289. Mitochondrial Fatty Acid Beta-Oxidation.

Names & Taxonomyi

Protein namesi
Recommended name:
Acyl carrier proteinUniRule annotation
Gene namesi
Name:Ndufab1Imported
Synonyms:Ndufab1_predictedImported
ORF Names:rCG_40178Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1305619. Ndufab1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Keywords - PTMi

PhosphopantetheineUniRule annotation

Proteomic databases

PeptideAtlasiD3ZF13.

PTM databases

PhosphoSitePlusiD3ZF13.

Expressioni

Gene expression databases

BgeeiENSRNOG00000018129.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024471.

Structurei

3D structure databases

ProteinModelPortaliD3ZF13.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini75 – 149Acyl carrierInterPro annotationAdd BLAST75

Sequence similaritiesi

Contains 1 acyl carrier domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG1748. Eukaryota.
COG0236. LUCA.
GeneTreeiENSGT00390000002127.
KOiK03955.
OMAiTHLCRQY.
OrthoDBiEOG091G0UIC.
PhylomeDBiD3ZF13.
TreeFamiTF314361.

Family and domain databases

Gene3Di1.10.1200.10. 1 hit.
HAMAPiMF_01217. Acyl_carrier. 1 hit.
InterProiIPR003231. Acyl_carrier.
IPR009081. PP-bd_ACP.
IPR006162. Ppantetheine_attach_site.
[Graphical view]
PfamiPF00550. PP-binding. 1 hit.
[Graphical view]
ProDomiPD000887. PD000887. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF47336. SSF47336. 1 hit.
TIGRFAMsiTIGR00517. acyl_carrier. 1 hit.
PROSITEiPS50075. ACP_DOMAIN. 1 hit.
PS00012. PHOSPHOPANTETHEINE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZF13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRVLCACV RRLPAAFAPL PRLPTLALAR PLSTILCPEG IWRRTGTLQP
60 70 80 90 100
TLALAQVPGT VTHLCRQYSD APPLTLEGIR DRVLYVLKLY DKIDPEKLSV
110 120 130 140 150
NSHFMKDLGL DSLDQVEIIM AMEDEFGFEI PDIDAEKLMC PQEIVDYIAD

KKDVYD
Length:156
Mass (Da):17,514
Last modified:April 20, 2010 - v1
Checksum:iCB661BDF01B826F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC096610 Genomic DNA. No translation available.
AC128018 Genomic DNA. No translation available.
CH473956 Genomic DNA. Translation: EDM17569.1.
CH473956 Genomic DNA. Translation: EDM17570.1.
CH473956 Genomic DNA. Translation: EDM17571.1.
RefSeqiNP_001099764.1. NM_001106294.1.
XP_006230250.1. XM_006230188.1.
XP_017444480.1. XM_017588991.1.
UniGeneiRn.1318.

Genome annotation databases

EnsembliENSRNOT00000024471; ENSRNOP00000024471; ENSRNOG00000018129.
GeneIDi293453.
KEGGirno:293453.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC096610 Genomic DNA. No translation available.
AC128018 Genomic DNA. No translation available.
CH473956 Genomic DNA. Translation: EDM17569.1.
CH473956 Genomic DNA. Translation: EDM17570.1.
CH473956 Genomic DNA. Translation: EDM17571.1.
RefSeqiNP_001099764.1. NM_001106294.1.
XP_006230250.1. XM_006230188.1.
XP_017444480.1. XM_017588991.1.
UniGeneiRn.1318.

3D structure databases

ProteinModelPortaliD3ZF13.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024471.

PTM databases

PhosphoSitePlusiD3ZF13.

Proteomic databases

PeptideAtlasiD3ZF13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000024471; ENSRNOP00000024471; ENSRNOG00000018129.
GeneIDi293453.
KEGGirno:293453.

Organism-specific databases

CTDi4706.
RGDi1305619. Ndufab1.

Phylogenomic databases

eggNOGiKOG1748. Eukaryota.
COG0236. LUCA.
GeneTreeiENSGT00390000002127.
KOiK03955.
OMAiTHLCRQY.
OrthoDBiEOG091G0UIC.
PhylomeDBiD3ZF13.
TreeFamiTF314361.

Enzyme and pathway databases

ReactomeiR-RNO-389661. Glyoxylate metabolism and glycine degradation.
R-RNO-611105. Respiratory electron transport.
R-RNO-6799198. Complex I biogenesis.
R-RNO-77289. Mitochondrial Fatty Acid Beta-Oxidation.

Gene expression databases

BgeeiENSRNOG00000018129.

Family and domain databases

Gene3Di1.10.1200.10. 1 hit.
HAMAPiMF_01217. Acyl_carrier. 1 hit.
InterProiIPR003231. Acyl_carrier.
IPR009081. PP-bd_ACP.
IPR006162. Ppantetheine_attach_site.
[Graphical view]
PfamiPF00550. PP-binding. 1 hit.
[Graphical view]
ProDomiPD000887. PD000887. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF47336. SSF47336. 1 hit.
TIGRFAMsiTIGR00517. acyl_carrier. 1 hit.
PROSITEiPS50075. ACP_DOMAIN. 1 hit.
PS00012. PHOSPHOPANTETHEINE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZF13_RAT
AccessioniPrimary (citable) accession number: D3ZF13
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 30, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.