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D3ZEB9

- D3ZEB9_RAT

UniProt

D3ZEB9 - D3ZEB9_RAT

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Protein
Submitted name:

Histone methyltransferase Pr-set7/Set8

Gene

LOC100909949

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseImported, Transferase

Enzyme and pathway databases

ReactomeiREACT_198737. Condensation of Prophase Chromosomes.

Names & Taxonomyi

Protein namesi
Submitted name:
Histone methyltransferase Pr-set7/Set8Imported
Submitted name:
Protein LOC100909949Imported
Gene namesi
Name:LOC100909949Imported
Synonyms:Pr-set7Imported, Setd8Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 12

Organism-specific databases

RGDi6501036. LOC100909949.
1587560. Setd8.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains SET domain.SAAS annotation

Phylogenomic databases

GeneTreeiENSGT00410000025501.
KOiK11428.
OMAiCSGMRSP.
OrthoDBiEOG70KGRN.

Family and domain databases

InterProiIPR016858. Hist_H4-K20_MeTrfase.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
PIRSFiPIRSF027717. Histone_H4-K20_mtfrase. 1 hit.
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51571. SAM_MT43_PR_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZEB9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVERRGPGRP RSDGENVFAG QSKIYAYMSP NKCSGMRSPL QEENSVAHHE
60 70 80 90 100
VKCPGKPLAG IYRKREEKRN AGNVIRSAVK SEEQKSKDTR RGPLAPFPNQ
110 120 130 140 150
KPEATEPPKT PPPSCDSTSV AVAKQALKKP LKGKQAPRKK SQGKTQQNRK
160 170 180 190 200
LTDFYPVRRS SRKSKAELQS EERKKIDELI ESGKEEGMKI DLIDGKGRGV
210 220 230 240 250
IATKRFSRGD FVVEYHGDLI EITDAKKREA LYAQDPSTGC YMYYFQYLSK
260 270 280 290 300
TYCVDATQET NRLGRLINHS KCGNCQTKLH DIDGVPHLIL IASRDIAAGE
310 320
ELLYDYGDRS KASIEAYPWL KH
Length:322
Mass (Da):36,216
Last modified:April 3, 2013 - v2
Checksum:iBB07F0BC32F9A066
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06071938 Genomic DNA. No translation available.
AABR06071939 Genomic DNA. No translation available.
AABR06071940 Genomic DNA. No translation available.
AB606422 mRNA. Translation: BAK43219.1.
RefSeqiNP_001233594.1. NM_001246665.1.
UniGeneiRn.8879.

Genome annotation databases

EnsembliENSRNOT00000066253; ENSRNOP00000062763; ENSRNOG00000001062.
GeneIDi689820.
KEGGirno:689820.
UCSCiRGD:1587560. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06071938 Genomic DNA. No translation available.
AABR06071939 Genomic DNA. No translation available.
AABR06071940 Genomic DNA. No translation available.
AB606422 mRNA. Translation: BAK43219.1 .
RefSeqi NP_001233594.1. NM_001246665.1.
UniGenei Rn.8879.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000066253 ; ENSRNOP00000062763 ; ENSRNOG00000001062 .
GeneIDi 689820.
KEGGi rno:689820.
UCSCi RGD:1587560. rat.

Organism-specific databases

CTDi 387893.
RGDi 6501036. LOC100909949.
1587560. Setd8.

Phylogenomic databases

GeneTreei ENSGT00410000025501.
KOi K11428.
OMAi CSGMRSP.
OrthoDBi EOG70KGRN.

Enzyme and pathway databases

Reactomei REACT_198737. Condensation of Prophase Chromosomes.

Miscellaneous databases

NextBioi 35566877.

Family and domain databases

InterProi IPR016858. Hist_H4-K20_MeTrfase.
IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
PIRSFi PIRSF027717. Histone_H4-K20_mtfrase. 1 hit.
SMARTi SM00317. SET. 1 hit.
[Graphical view ]
PROSITEi PS51571. SAM_MT43_PR_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. "Histone methyltransferase Pr-set7 represses the promoter activity of the tumor marker gene."
    Osada S., Hashizume H., Gomita U., Imagawa M.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: LiverImported.
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZEB9_RAT
AccessioniPrimary (citable) accession number: D3ZEB9
Secondary accession number(s): F7J138
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: October 29, 2014
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3