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Protein
Submitted name:

Protein Tmem115

Gene

Tmem115

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • replicative cell aging Source: RGD
  • retrograde vesicle-mediated transport, Golgi to ER Source: GO_Central
Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-RNO-6807878. COPI-mediated anterograde transport.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Tmem115Imported
Submitted name:
Transmembrane protein 115 (Predicted)Imported
Gene namesi
Name:Tmem115Imported
Synonyms:Tmem115_predictedImported
ORF Names:rCG_25499Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi1310540. Tmem115.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 37HelicalSequence analysisAdd BLAST26
Transmembranei57 – 86HelicalSequence analysisAdd BLAST30
Transmembranei98 – 121HelicalSequence analysisAdd BLAST24
Transmembranei127 – 149HelicalSequence analysisAdd BLAST23
Transmembranei161 – 180HelicalSequence analysisAdd BLAST20
Transmembranei186 – 205HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiD3ZE59.

PTM databases

PhosphoSitePlusiD3ZE59.

Expressioni

Gene expression databases

BgeeiENSRNOG00000021899.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031879.

Structurei

3D structure databases

ProteinModelPortaliD3ZE59.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2890. Eukaryota.
ENOG410XQM0. LUCA.
GeneTreeiENSGT00390000002470.
OMAiIMAIISW.
OrthoDBiEOG091G0B9B.
PhylomeDBiD3ZE59.
TreeFamiTF315100.

Family and domain databases

InterProiIPR013861. DUF1751_Mem_euk.
[Graphical view]
PfamiPF08551. DUF1751. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZE59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRALPGARQ HLGAILASAS VVVKALCAVV LFLYLLSFAV DTGCLAVTPG
60 70 80 90 100
YLFPPNFWIW TLATHGLMEQ HVWDVAISLA TVVVAGRLLE PLWGALELLI
110 120 130 140 150
FFSVVNVSVG LLGAFAYLLT YMASFNLVYL FTIRIHGALG FLGGVLVALK
160 170 180 190 200
QTMGDCVVLR VPQVRVSVVP MLLLALLLLL RLATLLQSPA LASYGFGLLS
210 220 230 240 250
SWVYLRFYQR HSRGRGDMAD HFAFATFFPE ILQPVVGLLA NLVHGLLVKV
260 270 280 290 300
KICQKTVKRY DVGAPSSITI SLPGTDPQDA ERRRQLALKA LNERLKRVED
310 320 330 340 350
QSAWPSMDDD EEEAGAKTDS PLPSEQASTP PGKGTAPEST LITFEAAPLL
Length:350
Mass (Da):38,054
Last modified:April 20, 2010 - v1
Checksum:i29107C53298BFDD5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC139927 Genomic DNA. No translation available.
CH473954 Genomic DNA. Translation: EDL77255.1.
RefSeqiNP_001102249.1. NM_001108779.1.
UniGeneiRn.7749.

Genome annotation databases

EnsembliENSRNOT00000032263; ENSRNOP00000031879; ENSRNOG00000021899.
GeneIDi363136.
KEGGirno:363136.
UCSCiRGD:1310540. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC139927 Genomic DNA. No translation available.
CH473954 Genomic DNA. Translation: EDL77255.1.
RefSeqiNP_001102249.1. NM_001108779.1.
UniGeneiRn.7749.

3D structure databases

ProteinModelPortaliD3ZE59.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031879.

PTM databases

PhosphoSitePlusiD3ZE59.

Proteomic databases

PeptideAtlasiD3ZE59.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000032263; ENSRNOP00000031879; ENSRNOG00000021899.
GeneIDi363136.
KEGGirno:363136.
UCSCiRGD:1310540. rat.

Organism-specific databases

CTDi11070.
RGDi1310540. Tmem115.

Phylogenomic databases

eggNOGiKOG2890. Eukaryota.
ENOG410XQM0. LUCA.
GeneTreeiENSGT00390000002470.
OMAiIMAIISW.
OrthoDBiEOG091G0B9B.
PhylomeDBiD3ZE59.
TreeFamiTF315100.

Enzyme and pathway databases

ReactomeiR-RNO-6807878. COPI-mediated anterograde transport.

Gene expression databases

BgeeiENSRNOG00000021899.

Family and domain databases

InterProiIPR013861. DUF1751_Mem_euk.
[Graphical view]
PfamiPF08551. DUF1751. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZE59_RAT
AccessioniPrimary (citable) accession number: D3ZE59
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 30, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.